| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2520 |
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| Symbol | |
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| ID | 4039343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2737532 |
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| End bp | 2738374 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977919 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_584666 |
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| Protein GI | 94311456 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.22403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAGG GCAGCAACAA CATCGGACGA TTCGATCGAT TCCGCCGATC TGGGCGAATG
GTGGCGCGGG TGGCAGCGCG GGTGGCAGGA ATGCTTGCCG CGCTGGCGTC GCTCTGCCTT
GCCGCGCCTG CCCATGCGGA GCTCTGGGGC TTTATCGACG CCGATGGCGT GGCGCACTTT
GCCGATGCGA AGCTCGATGC GCGCTACAAG CTGTTCATGA AGGATGGCGG CAGCTTCGAT
TCGAGCAACA TGCGCAATCT GCCCCGGGGT GGCCTGCCCG GCGGCAAGCT GGACCCCGAA
CGCGAGAAGC TGTACCGCTA CGTGCTCAAC CATCCGAACC TGGCGATGGT CGATCCGATC
ATCCAGAAGG CGGCTGCGGC GCAGAACGTG GACCCAGCAC TGGTCAAGGC CGTGATGGCC
GTGGAGAGCG GCTTCAATCC GACGGCGGTG TCGCCGAAGG GCGCGATCGG GCTGATGCAG
GTGATTCCGG ACACGGGCGC GCGCTTCGGC ATCGCCGCAG ACAAGCGCGG GACCGTGGAG
CAGAAACTGG CCGATCCACG TCTGAACATC ACCACCGGTG TGCGGTACCT GCGCTGGCTG
ATGGAGCTGT TCCCGAACAA CCTGGAGCTG GTGCTGGCCG CTTACAACGC CGGTGAGGGC
GCCGTGCAAC GCTACAACAA CCAGATCCCG CCATATCCCG AGACGCAGCA GTATGTCGCC
ACGGTGCTGG AGTTCTATCG CCTGTACCAG CCGGGCGAGG CGTCCGAGGC GCGCGTGGTG
CGGACCGGCA TGGCGGCCGA GCGGGTCAGG ATGGTGATCG GCGGTCGCCG GCCCATGCCC
TGA
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| Protein sequence | MRQGSNNIGR FDRFRRSGRM VARVAARVAG MLAALASLCL AAPAHAELWG FIDADGVAHF
ADAKLDARYK LFMKDGGSFD SSNMRNLPRG GLPGGKLDPE REKLYRYVLN HPNLAMVDPI
IQKAAAAQNV DPALVKAVMA VESGFNPTAV SPKGAIGLMQ VIPDTGARFG IAADKRGTVE
QKLADPRLNI TTGVRYLRWL MELFPNNLEL VLAAYNAGEG AVQRYNNQIP PYPETQQYVA
TVLEFYRLYQ PGEASEARVV RTGMAAERVR MVIGGRRPMP
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