| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2478 |
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| Symbol | livM |
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| ID | 4039301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2690909 |
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| End bp | 2692183 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977877 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_584624 |
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| Protein GI | 94311414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0258062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAG CGACTTCGAT TTCGCGGGCG TCCGTCCCGC AAACGTCGGT CTCCGACACG
CTGAAGAACG CGGTGACGGC CGCCGTGCTG ACGGCCATCC TGACCGTGCC GCTGCTCGGG
CTGCAACTGA AGCTCGATGG CTACAAGGTG GTGCTCGAGC CGCACTGGCG TCCGGTATGG
ATCGCCGTGG CCGTGGTGTT CATCTTCCAG TTGTTCAAGC CGATGCTGAC GCGCGCGCGC
GGCGCCGTGA AGCTGCCGGC GCTGCCCGCG ATGGGCGCGC AGCGGCAGCG CAGGGCGGTG
TGGCTGCTGC TGGCCGTGGG GCTGGTGTTT CCGTTCCTCG GCTCGCGCGG CGCGGTGGAC
GTGGCCACGC TGGCGCTGAT CTACGTGATC CTGGGCCTGG GCCTGAACAT CGTGGTGGGC
TTTGCCGGTC TGCTCGACCT GGGCTATGTG GGCTTCTACG CCGTGGGTGG CTACACCTAC
GCGCTGCTGA ACCAGTACTT CGGCCTGACG TTCTGGGAGT GCCTGCCGCT GGCCGCTGGT
CTGGCCGCGA CGTTCGGCTT CGTGCTCGGT TTCCCGGTGC TCCGGCTGCG TGGTGACTAC
CTGGCCATCG TGACGCTGGG CTTCGGCGAA ATCATTCGCC TGCTGCTGAA CAACCTGACC
AGCCTTACCG GCGGTCCGGA TGGCGTCTCG GGTATTCCGA AGCCGACCGT GTTCGGTATC
GAACTGGCAC GCAGCGCCAG CGTGGAAGGG GCGAAGACGT TCAATGACCT GATCGGTATT
CCCTATACCG GCCAGCACAT GGTGATCTTC CTGTACCTGC TCGGGCTGCT GCTGGTGGGC
TTCACGCTGT TCGTAACCAG TCGTCTGATC CGGATGCCGA TGGGCCGTGC CTGGGAGGCA
CTGCGCGAGG ACGAGATCGC GTGCCGCTCG CTGGGCCTGA ATCCCACGCG CATCAAGCTG
TCCGCGTTCA CGCTGGGCGC ATCGTTCGCC GGTCTGGCCG GCGCGTTCTT CGCGGCGCGC
CAGGGGCTGG TCACTCCGGA ATCCTTCACG TTCATCGAGT CCGCGCTGAT CCTGGCCGTG
GTCGTGCTCG GTGGCATGGG TTCGCAGCTT GGCGTGATCC TGGCGGCCAT CCTGCTGACC
GTGCTGCCCG AGGTGGCGCG TGACTTTGCC GAGTACCGGA TGCTGATTTT CGGCCTGGTG
ATGGTGCTGA TGATGATGTG GCGTCCGCAG GGCCTGCTGC CCGCAAGCCG TCCCCACGTG
GAGTTGCCGC GATGA
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| Protein sequence | MTQATSISRA SVPQTSVSDT LKNAVTAAVL TAILTVPLLG LQLKLDGYKV VLEPHWRPVW
IAVAVVFIFQ LFKPMLTRAR GAVKLPALPA MGAQRQRRAV WLLLAVGLVF PFLGSRGAVD
VATLALIYVI LGLGLNIVVG FAGLLDLGYV GFYAVGGYTY ALLNQYFGLT FWECLPLAAG
LAATFGFVLG FPVLRLRGDY LAIVTLGFGE IIRLLLNNLT SLTGGPDGVS GIPKPTVFGI
ELARSASVEG AKTFNDLIGI PYTGQHMVIF LYLLGLLLVG FTLFVTSRLI RMPMGRAWEA
LREDEIACRS LGLNPTRIKL SAFTLGASFA GLAGAFFAAR QGLVTPESFT FIESALILAV
VVLGGMGSQL GVILAAILLT VLPEVARDFA EYRMLIFGLV MVLMMMWRPQ GLLPASRPHV
ELPR
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