Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2469 |
Symbol | truA |
ID | 4039292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2680119 |
End bp | 2680955 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977868 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_584615 |
Protein GI | 94311405 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.371859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTGTGA ACCGCATCGC CATCGGCCTC CACTATGACG GCTCGGCCTA CTCCGGCTGG CAGTCGCAGC CCCATCGCAA TACCGTGCAG GACCACCTCG AGGACGCGAT CGAGCGCTTC GCAGGCGTGC GACTGCTGAC CACGGTAGCC GGGCGGACGG ATGCAGGTGT GCACGCGCTG GGGCAGGTCA TCCACCTCGA CACCGAACTC GACCGCGACC GCTTTTCATG GGTTCGCGGC GTCAACGCCT TCCTGCCTCC GTCGATCGCG CTGCAGTGGG CGGAGCCCGT CGACGAGAAC TTCCACGCGC GCTTCCTGGC CTACGAGCGC ATGTATTACT ACGCGCTGTA CACGGGGCCG CATCGCGCAC CGATGATTCA CGGCCGTGCC GGTTACCTGA TGCTGCCGCA CGGGCAGCGG CTCGATACCG AGGCGATGCG CCGGGCGTCG GCATGTCTGC TCGGCGAACA TGATTTCTCG GCGTTTCGCG CCGCCGAATG CCAGGCCAAG TCGCCCGTCA AGACGATGTA CGACGTGACG ATCGAGGCGG ATGGCAACTG GGTGTTCCTG CGCTTCCGGG CCAGCGCCTT CCTGCACCAC ATGGTGCGTA ACCTGATGGG CTGCCTCGTG GCGGTGGGGC GTGGCCGATA TCCTGCCGAG TGGATGGCGG AAGTGCTGGA AGGGCGCAAT CGCCAGAAGG CCGCGCCAAC CTTCATGCCG GACGGGCTCT ATCTGGTCGA CGTGAAGTAT CCTGAGCCAT ACCAGTTGCC CAAGGCGGAC CCGGCCGCCA GCTTCTTCCA CGGAGTATTT GTCGATGACA GCCACGATGG CGCTTGA
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Protein sequence | MPVNRIAIGL HYDGSAYSGW QSQPHRNTVQ DHLEDAIERF AGVRLLTTVA GRTDAGVHAL GQVIHLDTEL DRDRFSWVRG VNAFLPPSIA LQWAEPVDEN FHARFLAYER MYYYALYTGP HRAPMIHGRA GYLMLPHGQR LDTEAMRRAS ACLLGEHDFS AFRAAECQAK SPVKTMYDVT IEADGNWVFL RFRASAFLHH MVRNLMGCLV AVGRGRYPAE WMAEVLEGRN RQKAAPTFMP DGLYLVDVKY PEPYQLPKAD PAASFFHGVF VDDSHDGA
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