Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2458 |
Symbol | |
ID | 4039281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2668664 |
End bp | 2669521 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637977857 |
Product | ABC transporter |
Protein accession | YP_584604 |
Protein GI | 94311394 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00504776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.235465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC TGGATCCACC ACGAAGCACT GACGCGATCG TCGCCAGCGC GCCGCCTGTC GTGCAAACCC ACCAGCGCTA CCCTCAGCCG CTGCTGCCAC GCAATGCGCG CAACTGGATG ATGGTCTGGT ACCGCAACTA CATGGTCTGG AAGAAGCTGG CCGTGCCGTC ATTGATCGGC AACCTGGCGG ATCCGATGAT CTATCTGTTC GGCCTGGGTC TCGGGCTTGG ATTGCTGGTC GGCAATGTGC ATGGCGTGTC GTATATCGCG TTTCTCGCGG CAGGCACAAC TGCGTCGAGC GTGATGATGT CCGCTAGCTT CGAGTCGATG TATTCGGCGT TCTCGCGCAT GCATGTGCAG CGCACCTGGG AAGCAATCAT GCACGCTCCA CTGACGCTGG GCGACGTGGT GCTGGGCGAG GTGCTATGGG CAGCCAGCAA GGCTGTGCTG TCCGGGGTGG CGATCATGCT GGTGGCCGGT CTTCTGGGCT ATGCGCAGTT TCCGAGCGCG CTCGGGGCGC TACCGGTCAT CGTGCTGGCG GGTGTGACGT TCGCCAGTCT GGCAATGATC GTGACCGCGC TGGCACCGAG CTACGACTTC TTCATGTTCT ACCAGACGCT GGTCATGACG CCGATGCTGC TGCTATCGGG CGTGTTCTTT CCGCTCGAAC AGTTGCCGGA AGGCGCGCAG GCCGCCACGC AGGTGTTACC GCTGGCGCAC GCGGTGGCAT TGATTCGCCC GTTGATGTTG GGGCGGCCGG TGGAGAATGT CGCGCTGCAC GTCGGTGTGC TCGCGGCGTA TGCAGTCGTG GCGCTGACGG TGGCGCTGGT GCTGCTGAGG AAGAGGATGC TGCGGTGA
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Protein sequence | MSELDPPRST DAIVASAPPV VQTHQRYPQP LLPRNARNWM MVWYRNYMVW KKLAVPSLIG NLADPMIYLF GLGLGLGLLV GNVHGVSYIA FLAAGTTASS VMMSASFESM YSAFSRMHVQ RTWEAIMHAP LTLGDVVLGE VLWAASKAVL SGVAIMLVAG LLGYAQFPSA LGALPVIVLA GVTFASLAMI VTALAPSYDF FMFYQTLVMT PMLLLSGVFF PLEQLPEGAQ AATQVLPLAH AVALIRPLML GRPVENVALH VGVLAAYAVV ALTVALVLLR KRMLR
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