| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2298 |
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| Symbol | |
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| ID | 4039119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2518269 |
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| End bp | 2520299 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977696 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_584446 |
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| Protein GI | 94311236 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000135741 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000195203 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGCTGT TCTTGTGCGA GAAGCCCTCC CAGGGCAAAG ACATTGGCCG GATTCTCGGC
GCCACGCAGC GCGGTGAAGG CTGCCTCAAC GGTTCCGGCG TCACGGTCAC CTGGTGCATC
GGCCATCTCG TGGAGGCGGC GCCGCCCGAG GCCTACGACG AGCAGCTCAA ACGATGGTCC
GTTGAGCAGT TGCCCATCAT TCCCCAGCAC TGGCGGGTCG AGGTCAAACC GAAGACCGCC
ACGCAATTCA AGGTCGTCAA GGCGCTCTTG GCGAAGGCGA CTCACCTGGT TATCGCCACC
GATGCCGACC GCGAGGGCGA ATTGATCGCC CGCGAGATCG TGGAGCTTTG CGGCTACCGC
GGCCCCATCG AACGCCTGTG GCTGTCGGCG CTCAACGATG CGTCCATTCG GGCGGCACTG
GGCAAGCTGC GGCCTTCGGC CGAGACGCTT TCGATGTACC ACTCGGCGCT GGCGCGCTCC
CGTGCGGATT GGCTCGTGGG CATGAACCTG AGCCGGCTGT TCACGGTGCT GGGGCGACAG
GCGGGTTACG ACGGCGTGCT GTCGGTCGGC CGCGTACAGA CCCCGACGCT CAAGCTCGTT
GTGGACCGCG ACCGCGAGAT CGCGCGCTTC GTGTCCGTAC CATACTGGGC CATCGCCGTG
TCCCTGTTCG CAGGCGGTTC GACTTTCGCC GCGCAATGGG TTCCACCCGA TGCGTGCACC
GACGACGCAG GCCGCTGCCT GCGGCAGCCG GTCGCACAGC AGACCATGCA GCAGATCCGC
GCTGCGGGCA GTGCCCACGT CGTGTCGGTG GAGACTGAGC GTGTCCGCGA AGGCCCGCCG
CTGCCGTTCG ACCTGGGCAC CTTGCAGGAA GTGTGTTCCA AGCAGCTTGG GCTGGACGTG
CAGGAAACCT TGGAGATTGC CCAAGCCCTG TACGAGACGC ACAAGGCCAC GACGTACCCC
CGCTCGGACT CCGGCTACCT GCCCGAGAGC ATGTTTGCCG AAGTGCCCAC CGTTCTCGAC
AGCCTGCTCA AGACCGATCC CTCGCTGCGC TCGATCATGG GCCAGCTCGA CCGCTCGCAG
CGCTCGCGCG CCTGGAACGA TGGCAAGGTC ACGGCGCACC ACGGCATCAT CCCGACGCTC
GAACCGGCGA AGCTCTCCGC CATGAGCGAG AAGGAACTGG CCGTGTACAG GCTCATCCGG
TCGCATTACC TGGCGCAGTT CCTCCCTCAC CACGAGTTCG ACCGCACTGT GGCCAAGTTT
TCGTGCGGGG GGCAGAACCT GGCGGCCACG GGCAAGCAGG TTGTCATCCC GGGTTGGCGC
CAGGTGCTCG CCGAGCCGCA GGCCGAAGAC GGTGATGGCG AGGGCGATAC TGCGGTCCGC
GCCCAGGTGC TGCCCGCGCT GCCGAAACTG TATGAGGGCC TGGCATGCCA GGTGGCCGAC
GTCGATCTCA AGGCACTCAA GACGCTGCCG CCCAAACCGT ACACGCAAGG CGAGTTGGTC
AAGTCCATGA AAGGCGTCGC CAAGCTGGTG TCCGATCCCC GCCTGAAGCA GAAGCTCAAG
GATACGGTTG GCATCGGCAC CGAAGCGACG CGGGCCAACA TCATCGGCGG CCTGATCGCT
CGCGGCTACC TCGTGAAGAA GGGGCGCGCC ATCCGCGCCT CGGATGCGGC TTTCACTTTG
ATCGATGCCG TGCCTGCGGC GATTGCCGAC CCTGGCACCA CCGCCGTCTG GGAACAGGCG
CTCGACATGA TCGAGGCCGG ACAGCTCACC CTGGACGTGT TCATCGGCAA GCAGGCCGCG
TGGATTTCGC AGTTGATTGC GCAGTACGGC AGCGCCTCCC TGTCCATCAA GGTTCCCCAA
GGGCCGGCAT GCCCGCAGTG CGGCGCACCC ACGCGCCAGC GCAGCGGCAA GAGCGGCCCG
TTCTGGTCGT GCAGCCGCTA CCCGGACTGC AAAGGCACGC TGCCAGTCGA ATCCGGCAGC
TCCAAGCGCG GCGCCTCGCG CCCGCGCCGT AGCGGCCGCA AAGGCTCCTG A
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| Protein sequence | MRLFLCEKPS QGKDIGRILG ATQRGEGCLN GSGVTVTWCI GHLVEAAPPE AYDEQLKRWS
VEQLPIIPQH WRVEVKPKTA TQFKVVKALL AKATHLVIAT DADREGELIA REIVELCGYR
GPIERLWLSA LNDASIRAAL GKLRPSAETL SMYHSALARS RADWLVGMNL SRLFTVLGRQ
AGYDGVLSVG RVQTPTLKLV VDRDREIARF VSVPYWAIAV SLFAGGSTFA AQWVPPDACT
DDAGRCLRQP VAQQTMQQIR AAGSAHVVSV ETERVREGPP LPFDLGTLQE VCSKQLGLDV
QETLEIAQAL YETHKATTYP RSDSGYLPES MFAEVPTVLD SLLKTDPSLR SIMGQLDRSQ
RSRAWNDGKV TAHHGIIPTL EPAKLSAMSE KELAVYRLIR SHYLAQFLPH HEFDRTVAKF
SCGGQNLAAT GKQVVIPGWR QVLAEPQAED GDGEGDTAVR AQVLPALPKL YEGLACQVAD
VDLKALKTLP PKPYTQGELV KSMKGVAKLV SDPRLKQKLK DTVGIGTEAT RANIIGGLIA
RGYLVKKGRA IRASDAAFTL IDAVPAAIAD PGTTAVWEQA LDMIEAGQLT LDVFIGKQAA
WISQLIAQYG SASLSIKVPQ GPACPQCGAP TRQRSGKSGP FWSCSRYPDC KGTLPVESGS
SKRGASRPRR SGRKGS
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