Gene Rmet_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2221 
Symbol 
ID4039039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2435093 
End bp2435881 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID637977616 
ProductABC transporter-related protein 
Protein accessionYP_584369 
Protein GI94311159 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000225021 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.260255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCCG TACTGGAACA CGCCCCCGAG GCCGCTGGCG CCCGGATCGA CATTCGCGGT 
GTCAGCCACG CCTTCGGCGA CGGCGCGCGG CGGCTGCCGG TGCTGGACGA CGTCAGCCTC
GACGTCGCGC CCGGCGAGTT CGTCGCGCTG CTCGGCCCGA GTGGCTGCGG CAAGTCCACG
CTGCTGCGCC TGGTGGCCGG GCTCGAAACG CCGAACGCCG GGGAGATCCG GCAGGATGGC
ACGCCCATCG ACCACCCCGA TCCCTCCCGC ATCGTGGTGT TCCAGGACCC CACGCTGTAC
CCGTGGCGGC GCGTGCGTGA CAACGTCGCG CTCGGCCTGC AGGCTCGCGG CCTGTTGCGA
CGTGAAGGCC ATCGCGTCGA CGCCGCGCTC CGACGCGTGG GCCTCGAAGC GTTCGCGGAT
GCCTTCCCGC ATCAACTCTC CGGCGGCATG GCGCAACGCG TGGCGCTGGC CCGCGCGCTT
GTCAACGATC CACGGCTGCT CGTGCTCGAC GAACCGCTCG GCAAACTGGA CTCGCTCACG
CGCCTGGCCA TGCAGAGCGA TCTGGTCGAA CTGTGGCAAC GCGCTGGATT CTCCGCCCTG
CTGGTCACGC ATGATGTCGA GGAGGCGCTG TTCCTGGCGC AACGCGTCAT CGTGTTCAGC
CAGCGCCCGG CCAAGATCAC CGCACAGATC GAGGTGGACC TGCCCTACCC ACGCCATCGC
GGCGACCCTC GGCTGACCGA ACTGCGGCAC GAAGCGTTGC GGCATCTGGG TCTGGATGCC
AGCTGGTAA
 
Protein sequence
MVAVLEHAPE AAGARIDIRG VSHAFGDGAR RLPVLDDVSL DVAPGEFVAL LGPSGCGKST 
LLRLVAGLET PNAGEIRQDG TPIDHPDPSR IVVFQDPTLY PWRRVRDNVA LGLQARGLLR
REGHRVDAAL RRVGLEAFAD AFPHQLSGGM AQRVALARAL VNDPRLLVLD EPLGKLDSLT
RLAMQSDLVE LWQRAGFSAL LVTHDVEEAL FLAQRVIVFS QRPAKITAQI EVDLPYPRHR
GDPRLTELRH EALRHLGLDA SW