Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2221 |
Symbol | |
ID | 4039039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2435093 |
End bp | 2435881 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637977616 |
Product | ABC transporter-related protein |
Protein accession | YP_584369 |
Protein GI | 94311159 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000225021 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.260255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGCCG TACTGGAACA CGCCCCCGAG GCCGCTGGCG CCCGGATCGA CATTCGCGGT GTCAGCCACG CCTTCGGCGA CGGCGCGCGG CGGCTGCCGG TGCTGGACGA CGTCAGCCTC GACGTCGCGC CCGGCGAGTT CGTCGCGCTG CTCGGCCCGA GTGGCTGCGG CAAGTCCACG CTGCTGCGCC TGGTGGCCGG GCTCGAAACG CCGAACGCCG GGGAGATCCG GCAGGATGGC ACGCCCATCG ACCACCCCGA TCCCTCCCGC ATCGTGGTGT TCCAGGACCC CACGCTGTAC CCGTGGCGGC GCGTGCGTGA CAACGTCGCG CTCGGCCTGC AGGCTCGCGG CCTGTTGCGA CGTGAAGGCC ATCGCGTCGA CGCCGCGCTC CGACGCGTGG GCCTCGAAGC GTTCGCGGAT GCCTTCCCGC ATCAACTCTC CGGCGGCATG GCGCAACGCG TGGCGCTGGC CCGCGCGCTT GTCAACGATC CACGGCTGCT CGTGCTCGAC GAACCGCTCG GCAAACTGGA CTCGCTCACG CGCCTGGCCA TGCAGAGCGA TCTGGTCGAA CTGTGGCAAC GCGCTGGATT CTCCGCCCTG CTGGTCACGC ATGATGTCGA GGAGGCGCTG TTCCTGGCGC AACGCGTCAT CGTGTTCAGC CAGCGCCCGG CCAAGATCAC CGCACAGATC GAGGTGGACC TGCCCTACCC ACGCCATCGC GGCGACCCTC GGCTGACCGA ACTGCGGCAC GAAGCGTTGC GGCATCTGGG TCTGGATGCC AGCTGGTAA
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Protein sequence | MVAVLEHAPE AAGARIDIRG VSHAFGDGAR RLPVLDDVSL DVAPGEFVAL LGPSGCGKST LLRLVAGLET PNAGEIRQDG TPIDHPDPSR IVVFQDPTLY PWRRVRDNVA LGLQARGLLR REGHRVDAAL RRVGLEAFAD AFPHQLSGGM AQRVALARAL VNDPRLLVLD EPLGKLDSLT RLAMQSDLVE LWQRAGFSAL LVTHDVEEAL FLAQRVIVFS QRPAKITAQI EVDLPYPRHR GDPRLTELRH EALRHLGLDA SW
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