| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2188 |
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| Symbol | |
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| ID | 4039005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2396120 |
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| End bp | 2398069 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977582 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_584336 |
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| Protein GI | 94311126 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.350229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.438236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGCA GCTACCCGTT GGCAAGGCAA TTGGAAAGGA GTTCGGCCTT GAATAACAAC
CTGTTTCAAA AGGCGGCAAT CTGGCTCGTA ATCGCGCTGG TATTGTTCAC CGTCTTCAAG
CAGTTCGACA AACCGCGTGC CCAGGACAGT GTCACCTATT CGCAGTTCAT GGATGACGCC
AAGAACGGCA AGGTGTCGCG TGTCGACGTG CAGGGCCGCA ACCTCGTGGT TTCGCCCAAG
GAAGGCTCCA AGTACACGAT CATTTCGCCG GGCGATATCT GGATGGTCGG CGACCTGATG
AAGTATGGCG TCCAGGTGAC CGGCAAGGCT GACGATGAGC CCAACGTGCT GGTCCAGGCG
CTGTACTACC TCGGGCCGAC GCTCCTGATC ATCGTTTTCT GGTTCTACAT GATGCGGCAG
ATGCAGGGCG GGGGGAAAGG CGGAGCCTTC TCCTTCGGTA AATCCCGCGC GCGCCTGATC
GACGAGAACC AGAACGCCGT TACCTTCGCT GACGTCGCGG GTTGCGACGA GTCGAAGGAA
GAAGTGGTCG AACTGGTCGA CTTCCTGAAG GACCCGCAGA AATTCCAGAA GCTGGGCGGA
CGTATTCCGC GCGGCGTGCT GCTGGTCGGG CCTCCGGGTA CCGGCAAGAC GCTGCTGGCG
CGTGCCATCG CCGGTGAGGC CAAGGTGCCG TTCTTCAGCA TCTCGGGTTC GGACTTTGTG
GAAATGTTCG TCGGCGTGGG TGCGGCTCGT GTGCGCGACA TGTTCGAGAA CGCCAAGAAG
CAGGCCCCCT GCATCGTGTT CATCGACGAA ATCGACGCGG TCGGCCGCCA TCGTGGCGCC
GGCATGGGCG GCGGTAACGA CGAGCGCGAG CAGACCCTGA ACCAGATGCT GGTCGAGATG
GATGGCTTCG AGGCCAACTC TGGCGTGATC GTGATCGCCG CGACCAACCG TGCCGACGTG
CTGGACAAGG CACTGCTGCG TCCGGGCCGT TTCGACCGTC AGGTCTATGT GGGCCTGCCG
GACATCCGCG GCCGCGAGCA GATCCTGAAG GTCCATATGC GCAAGGTGCC GATCGGCAAC
GACGTGGATG CATCGATCAT CGCTCGTGGT ACGCCTGGCT TCTCGGGTGC GGACTTGGCC
AACCTGGTCA ACGAGGCTGC GCTGTTCGCC GCCCGCCGCA GCAAGCGCGT GGTGGACATG
CAGGACTTCG AGGACGCCAA GGACAAGATT TATATGGGTC CGGAGCGCAA GTCGACGGTC
ATGCGCGAGG AAGAGCGCAA GGCCACGGCT TACCACGAGT CTGGCCATGC CGTGGTTGCC
AAGCTGCTGC CGAAGGCCGA TCCGGTCCAC AAGGTCACGA TCATGCCGCG TGGTTGGGCG
CTGGGCGTAA CCTGGCAGTT GCCGGAGCAT GACAAGTACT CAAAGTACAA GGACAACATG
CTTGAGGAAA TTGCCATCCT GTTCGGCGGC CGCGCTGCCG AAGAGGTGTT CCTCAATGCC
ATGAGCACCG GTGCTTCGAA CGACTTCGAG CGTGCCACCA AGATCGCCCG CGATATGGTG
ACCCGCTTTG GCATGAGCGA TTCGCTCGGC GCGATGGTCT ACGTGGACAC AGAGCAGGAC
GGCATGTTCG GCAAGCTGTC GTCGAAGACC GTGTCCGAAG CGACGCAGCA GAAGGTTGAC
GCAGAGATCC GCCGCATCAT TGACGATCAA TACGCGCTGG CCAAGCGCTT GCTCGAAGAG
AACCGCGACA AGGTCGAAGC GATGACCAAC GCGCTGATGG AGTGGGAAAC GATCGACGCC
GAACAGGTGA ACGACATCAT GGCGGGCCGT CCGCCGCGTC CGCCGCGTGG CGCGCAGGGT
CCGAACAGCG GTGGCAATAC GCCTCCTGGC GGCTCCCCGG TGGCACCGAC CAATGCACCC
GCAACGGCAC GTGCCGACGA AACGGTTTGA
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| Protein sequence | MQCSYPLARQ LERSSALNNN LFQKAAIWLV IALVLFTVFK QFDKPRAQDS VTYSQFMDDA
KNGKVSRVDV QGRNLVVSPK EGSKYTIISP GDIWMVGDLM KYGVQVTGKA DDEPNVLVQA
LYYLGPTLLI IVFWFYMMRQ MQGGGKGGAF SFGKSRARLI DENQNAVTFA DVAGCDESKE
EVVELVDFLK DPQKFQKLGG RIPRGVLLVG PPGTGKTLLA RAIAGEAKVP FFSISGSDFV
EMFVGVGAAR VRDMFENAKK QAPCIVFIDE IDAVGRHRGA GMGGGNDERE QTLNQMLVEM
DGFEANSGVI VIAATNRADV LDKALLRPGR FDRQVYVGLP DIRGREQILK VHMRKVPIGN
DVDASIIARG TPGFSGADLA NLVNEAALFA ARRSKRVVDM QDFEDAKDKI YMGPERKSTV
MREEERKATA YHESGHAVVA KLLPKADPVH KVTIMPRGWA LGVTWQLPEH DKYSKYKDNM
LEEIAILFGG RAAEEVFLNA MSTGASNDFE RATKIARDMV TRFGMSDSLG AMVYVDTEQD
GMFGKLSSKT VSEATQQKVD AEIRRIIDDQ YALAKRLLEE NRDKVEAMTN ALMEWETIDA
EQVNDIMAGR PPRPPRGAQG PNSGGNTPPG GSPVAPTNAP ATARADETV
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