| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2125 |
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| Symbol | |
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| ID | 4038933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2306754 |
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| End bp | 2307950 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977511 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_584273 |
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| Protein GI | 94311063 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.919556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.446535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC AGATTCTCGA CGGCATCCGC GTTCTCGAAC TGGGCCAGCT GATTGCAGGC
CCCTTTGCCG CCAAGACACT TGCCGATTTC GGCGCACACG TGGTCAAGGT GGAGCCGCCC
GGGCAGGGCG ATCCGCTGCG AAAGTGGCGC ATGTTGCACG AAGATACCTC GGTCTGGTGG
GAAGCCCAGT CGCGCAACAA GCAGTCGATT GCCATCGACC TGCGCCAGCC GGAGGGGCAG
GCTCTGGTAC GCAAGCTGGC CAGCGAGGCC GACGTCCTGA TCGAGAACTT CCGCCCGGGA
ACCATGGAGA AATGGGGGCT CGGCTGGGAT GTGCTTCATG CCGACAATCC AAAGCTGATC
ATGGTGCGGG TCTCGGGCTA CGGCCAGAGC GGCCCGAAGC GGGATGAGCC CGGCTTTGCG
GCGGTGGCCG AAGCGATGAG CGGGCTGCGC TACCTGACCG GCGAGCCTGG ACGCCCGCCC
GTGCGCGCGG GCTTGTCGCT GGGTGACACG ATCGCCGGCC TGCATGGCGC GCTTGGCGTG
CTGCTGGCGC TGTACGAACG CGATGCGCGT GGTGGTAAAG GCCAGGTCAT CGACGTGGCG
CTGTATGAGT CGCTGTTCAA TCTGAGCGAA AGCCTGTTGC CCGAGTACTC CGCGTTCGGC
GCTGTGCGCC AGCCGGCCGG GGGTGCCTTG CCGGGAATCG CGCCGTCGAA TGCCTACCTG
TGCGGCTGCG GCGAGTATGT GCTGATCGCC GCCAACGGCG ACGCGATCTT CCGCCGCCTG
ATGGCCGCGA TGGGTCGCAA CGACCTGGGC GAAGACCCGG CGCTGGCACG CAATGATGGC
CGCGTGAAGC GTGTCGACGA GATCGATGCC GCGATTACCG CCTGGACGAA GACACAAACC
GTGGCCTCCG CGCTGGAAGT GCTGCGTACC GCCGACGTGC CGTCTGGCCG CATCTACACC
GTCAAGGACA TTGCCGAAGA CCCGCACTAC CGGGCGCGCG GCGTAATCGA GACGGTGACA
TCCGCGAAGG GCCTGCAGGT GGAGGTGCCA GGCATCATGC CGAAGCTGTC GGGCAATCCC
GGCGGCATCC ACGATCGCGC GCCGACGCTG GGCGAGCATA CCGATTCCGT GCTGGCCGAT
GCCGGCTTCG ACGCGGCGGC CATTGCCGAC CTGCGTAATC GCGGAGTGAT TGCATGA
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| Protein sequence | MARQILDGIR VLELGQLIAG PFAAKTLADF GAHVVKVEPP GQGDPLRKWR MLHEDTSVWW
EAQSRNKQSI AIDLRQPEGQ ALVRKLASEA DVLIENFRPG TMEKWGLGWD VLHADNPKLI
MVRVSGYGQS GPKRDEPGFA AVAEAMSGLR YLTGEPGRPP VRAGLSLGDT IAGLHGALGV
LLALYERDAR GGKGQVIDVA LYESLFNLSE SLLPEYSAFG AVRQPAGGAL PGIAPSNAYL
CGCGEYVLIA ANGDAIFRRL MAAMGRNDLG EDPALARNDG RVKRVDEIDA AITAWTKTQT
VASALEVLRT ADVPSGRIYT VKDIAEDPHY RARGVIETVT SAKGLQVEVP GIMPKLSGNP
GGIHDRAPTL GEHTDSVLAD AGFDAAAIAD LRNRGVIA
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