Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2098 |
Symbol | |
ID | 4038906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2278526 |
End bp | 2279428 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977484 |
Product | HflC protein |
Protein accession | YP_584246 |
Protein GI | 94311036 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0730184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGAC TGATTTCCTT TGTCATTGGC CTGTTTATCC TGCTGGCCGT TGCTTCGTCG ATGCTGTTCG TGGTCGACCA GCGCCAGTAC GCCGTCGTCT TCGCTTTCGG CGAAATCAAG CAGGTCGTGC GTGAGCCCGG TCTGCATTTC AAGCTGCCGC CGCCGTTGCA GAACGTAGTG TTCATGGATC GTCGTCTGCA GACGATCGAT GTCGCAGCCA ACGAGCGTTT CCTGACCGCC GAGAAGAAAT CGATGGTGGT GGACTGGTTC GTGAAGTGGC GCATCACCGA TCCGCGCAAA TTCTTCGTGG CGTTTGGTGG CAACCTGCGC GGCGCGCAGG ACCGCATGAC GCAGCGTATC GATGCTGTGG CGCGTGAGGA GTTCGGCAAG CGCACCGTGG CGGATGTGGT GGCGGGCCAG CGCGAGCAGG TCATGCAGAA CATCCGGGTT GGTATGGCCG AGTACGCGCA GTCGGTGGGT GTCGAGATCA TCGATGTGCG CCTGAAGCGT GTGGATCTGC TGCCGGCCAT CAGCGAGTCG GTCTATCGAC GCATGGAGGC CGAGCGCAAG CGCGTGGCCA ACGAACTGCG TTCGACTGGC GCCGCGGAAG GTGAGAAAAT CCGGGCCGAT GCTGATCGCC AGCGTGAGGT GGTGCTGGCC GAGGCTTATC GTGATGCGCA GGTGGTCAAG GGTGAGGGCG ATGCCAAGGC TTCGCAGATC TATGCCGATG CATTCGGCAA GGATCCGAGC TTCGCCCAGT TCTGGCGCAG CATGGAGGCC TACCGCAACA CGTTCCGCGA CAAGGGCAAC GTGATGGTGC TGGAGCCCAA TTCGGACTTC TTCCGCTATA TGCGTTCGCC GGGTGGCAAC ACCGCACCGG CCCCGTCAGG TGGCAAGAAG TAG
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Protein sequence | MNRLISFVIG LFILLAVASS MLFVVDQRQY AVVFAFGEIK QVVREPGLHF KLPPPLQNVV FMDRRLQTID VAANERFLTA EKKSMVVDWF VKWRITDPRK FFVAFGGNLR GAQDRMTQRI DAVAREEFGK RTVADVVAGQ REQVMQNIRV GMAEYAQSVG VEIIDVRLKR VDLLPAISES VYRRMEAERK RVANELRSTG AAEGEKIRAD ADRQREVVLA EAYRDAQVVK GEGDAKASQI YADAFGKDPS FAQFWRSMEA YRNTFRDKGN VMVLEPNSDF FRYMRSPGGN TAPAPSGGKK
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