Gene Rmet_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2098 
Symbol 
ID4038906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2278526 
End bp2279428 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID637977484 
ProductHflC protein 
Protein accessionYP_584246 
Protein GI94311036 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0730184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC TGATTTCCTT TGTCATTGGC CTGTTTATCC TGCTGGCCGT TGCTTCGTCG 
ATGCTGTTCG TGGTCGACCA GCGCCAGTAC GCCGTCGTCT TCGCTTTCGG CGAAATCAAG
CAGGTCGTGC GTGAGCCCGG TCTGCATTTC AAGCTGCCGC CGCCGTTGCA GAACGTAGTG
TTCATGGATC GTCGTCTGCA GACGATCGAT GTCGCAGCCA ACGAGCGTTT CCTGACCGCC
GAGAAGAAAT CGATGGTGGT GGACTGGTTC GTGAAGTGGC GCATCACCGA TCCGCGCAAA
TTCTTCGTGG CGTTTGGTGG CAACCTGCGC GGCGCGCAGG ACCGCATGAC GCAGCGTATC
GATGCTGTGG CGCGTGAGGA GTTCGGCAAG CGCACCGTGG CGGATGTGGT GGCGGGCCAG
CGCGAGCAGG TCATGCAGAA CATCCGGGTT GGTATGGCCG AGTACGCGCA GTCGGTGGGT
GTCGAGATCA TCGATGTGCG CCTGAAGCGT GTGGATCTGC TGCCGGCCAT CAGCGAGTCG
GTCTATCGAC GCATGGAGGC CGAGCGCAAG CGCGTGGCCA ACGAACTGCG TTCGACTGGC
GCCGCGGAAG GTGAGAAAAT CCGGGCCGAT GCTGATCGCC AGCGTGAGGT GGTGCTGGCC
GAGGCTTATC GTGATGCGCA GGTGGTCAAG GGTGAGGGCG ATGCCAAGGC TTCGCAGATC
TATGCCGATG CATTCGGCAA GGATCCGAGC TTCGCCCAGT TCTGGCGCAG CATGGAGGCC
TACCGCAACA CGTTCCGCGA CAAGGGCAAC GTGATGGTGC TGGAGCCCAA TTCGGACTTC
TTCCGCTATA TGCGTTCGCC GGGTGGCAAC ACCGCACCGG CCCCGTCAGG TGGCAAGAAG
TAG
 
Protein sequence
MNRLISFVIG LFILLAVASS MLFVVDQRQY AVVFAFGEIK QVVREPGLHF KLPPPLQNVV 
FMDRRLQTID VAANERFLTA EKKSMVVDWF VKWRITDPRK FFVAFGGNLR GAQDRMTQRI
DAVAREEFGK RTVADVVAGQ REQVMQNIRV GMAEYAQSVG VEIIDVRLKR VDLLPAISES
VYRRMEAERK RVANELRSTG AAEGEKIRAD ADRQREVVLA EAYRDAQVVK GEGDAKASQI
YADAFGKDPS FAQFWRSMEA YRNTFRDKGN VMVLEPNSDF FRYMRSPGGN TAPAPSGGKK