| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2087 |
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| Symbol | |
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| ID | 4038894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2266681 |
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| End bp | 2267334 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977472 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_584235 |
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| Protein GI | 94311025 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.332036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GTATCCTACT GATCGACGAT CACACATTGT TCCGCTCGGG TGTCCGTGCG
CTGCTGCAGC GGCAGAGCGA TTTCGAAGTG GTCGACGAAG CCGCCGATGG CGTGGAAGGC
ATCAAGCGGG CCAAACAGCA TCGACCGGAC GTGATCCTGC TCGATCTGAA TATGCCGGGC
CTGTCAGGAC TCGAAGCCCT GCAACTGCTG ACGGAGGATC TGCCGGAATG CGCGGTGATT
GTGCTGACGG TATCCGAGGA AGGAGAAGAA CTGGCCAGCG CCCTGCGCAG CGGTGCACGG
GGTTACCTGA TCAAGAACAT AGAGACCGAA GCGCTGACGA GCGCGATCCG GCGGGCTGCC
GCAGGGGAAC CGGTGATCTC CGACACGATG ACCGCCAAGC TGGTGCAGCA GTTCAAGGCT
CCGGCGGCCG CACCTGCCCT GCTAGAGCGT GGCGACGCGG CCCCTCTGAC GGCGCGTGAG
CGGGACATTG TGCGCGGACT GGTACGCGGC GAAAGCAACA AGATGATCGC GCGCGCGCTG
GGCGTGGCGG AGAGCACAGT CAAGATTCAC GTGCAGAACA TTCTGAAGAA GCTCAATCTG
GCCAGCCGCG TGCAAGTGGC CGTCTACGCA GTGGAGCATG GGCTCACCGC GTGA
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| Protein sequence | MTIRILLIDD HTLFRSGVRA LLQRQSDFEV VDEAADGVEG IKRAKQHRPD VILLDLNMPG
LSGLEALQLL TEDLPECAVI VLTVSEEGEE LASALRSGAR GYLIKNIETE ALTSAIRRAA
AGEPVISDTM TAKLVQQFKA PAAAPALLER GDAAPLTARE RDIVRGLVRG ESNKMIARAL
GVAESTVKIH VQNILKKLNL ASRVQVAVYA VEHGLTA
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