Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2072 |
Symbol | |
ID | 4038879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2247655 |
End bp | 2248938 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977457 |
Product | major facilitator transporter |
Protein accession | YP_584220 |
Protein GI | 94311010 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.314565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCC CAAACCTCCC CTCCAGCAAG CCAGAACCCG TCTCTTCCGG TGCTTGGACG ACGCTCTGGT CCAGCACCTT TGCCTTCACG ATCTGTTTCG CCGTCTGGAT GCTGTTTGCC GTGCTCGGCA TTCCGCTCAA GAAGGAACTC GGCCTGAATG ACACCGAGTT CGGCCTGCTG GCAGCCACGC CGGTGCTGAG CGGCTCCCTG ATCCGCGTGC CGCTCGGCAT CTGGACGGAC CGTTACGGCG GCCGCATCGT GTTCTTTGTG CTGATGCTGC TGACGGTGAT CCCCATCTGG CTGATCTCGT ACGCGCATAC GCTGTGGCAA TTGCTGGTGC TCGGGCTGTT CGTCGGCCTG GCGGGCGGCT CGTTCTCGGT GGGCACGCCA TACGTGGCCC GCTGGTTCCC GCGCTCGCGC CAGGGCCTGG CCATGGGCAT CTTCGGTGCC GGCAACTCGG GCGCCGCCTT GACCAAGTTC GTCGCGCCCG CTCTGATCCT GGCCGCCGGC ACCTGGGAAA TCGTGCCGAG GGTGTACTCG GTGGCGATGC TGATCACCGC CATCGTGTTC TGGCTGTTCT CGCGCAGCAA TCCCGCGCAC CGCGTTTCGT CGGCCACCAG CTGGCGTGCG CAACTTGCCG TCATGCGTGA TCCGCGTGTC TGGCGCTATT CGCAGTACTA CTCGGTCGTG TTCGGCGGCT ACGTTGGCCT CTCGCTGTGG ATGACCAAGT ACTACATCGG TGAGTACGGC TTCGACATGA AGACGGCCGC GTTCCTCGCT GCCTGCTTCT CGCTGCCGGG TGGCGTGCTC CGGGCGATCG GCGGCTGGAT CTCGGACCGC TACGGCGCGC ACCGCACCAC GTGGTGGGTC ATGTGGGTCA GCTGGGTCAC GTTCTTCCTG CTCAGCTACC CGAGGAGCGA CTTCACGATC CACACCGCCA ACGGCCCGGA GAGCTTCCAT ATCGCGCTCT CGCCAACGGT GTTCACCATC CTGATGTTCG TGGTCGGTAT CGCGTTCGCG GTCGGCAAGG CCTCGGTCTT CAAATTCATC TCGAACGATT TCACACACAA CATCGGCGCG GTCTCCGGCG TGGTCGGTCT GGCCGGCGGC CTCGGTGGAT TCATCCTCCC GATCCTGTTC GGCGCACTGG CTGACCTGAC CGGCATCCGC ACCAGCTGTT TCATGCTGAT GTACGGCGCG GTCTGCGTGA GTCTGGTGTG GATGCACTAC AGCCAGCGCG CGGCAAACGC CAGGCCGACG CCCGAAACCC TGCAAGCCGC CTGA
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Protein sequence | MATPNLPSSK PEPVSSGAWT TLWSSTFAFT ICFAVWMLFA VLGIPLKKEL GLNDTEFGLL AATPVLSGSL IRVPLGIWTD RYGGRIVFFV LMLLTVIPIW LISYAHTLWQ LLVLGLFVGL AGGSFSVGTP YVARWFPRSR QGLAMGIFGA GNSGAALTKF VAPALILAAG TWEIVPRVYS VAMLITAIVF WLFSRSNPAH RVSSATSWRA QLAVMRDPRV WRYSQYYSVV FGGYVGLSLW MTKYYIGEYG FDMKTAAFLA ACFSLPGGVL RAIGGWISDR YGAHRTTWWV MWVSWVTFFL LSYPRSDFTI HTANGPESFH IALSPTVFTI LMFVVGIAFA VGKASVFKFI SNDFTHNIGA VSGVVGLAGG LGGFILPILF GALADLTGIR TSCFMLMYGA VCVSLVWMHY SQRAANARPT PETLQAA
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