| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2029 |
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| Symbol | truB |
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| ID | 4038836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2195241 |
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| End bp | 2196185 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977414 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_584177 |
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| Protein GI | 94310967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0245667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0911973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT CCTCCGCGAC CCGACCGCCC CGGCTGCCAC GCCGCGACGT GCACGGTGTG
CTGCTGCTCG ACAAGCCTCT GGGTCTGTCG TCCAACGACG CGCTGGTACG CGCCAAGCGA
CTGCTGCGCG CGAACAAGGC CGGCCACACG GGCACGCTGG ATCCGCTGGC GACTGGACTG
CTGCCGCTGT GTTTTGGCGA GGCCACCAAG TTCTCTCAGG ATCTGCTTGA CGCGGACAAG
ACCTACGAGG CGAAAGTCCG GCTTGGCGCG ACGACGACCA CAGGCGATGC CGAGGGCGAG
ATCGTCGTCG AGCGACTGGT GACATGCGAT CACGACGCGC TTGATGCTGC GGTTGCGCGC
TTTACCGGAG AGATCGAACA GGTACCGCCG ATGTACTCGG CACTCAAGAA GGACGGCAAG
CCGCTTTACG AGTATGCCCG GGCCGGGCAG ACCGTCGAGC GCGCGGCGCG GCAGGTAACG
ATTCACGCCA TCACGCTGCT GGACGTTGAT TTGCCTGCGG CGATGTTCAC GATGCGTGTC
ACATGCAGCA AGGGCACGTA CATTCGCACG CTGGCCGAAG ATGTCGGCGA GGCGCTGGGT
TGCGGCGCGC ACCTGATTGG GCTGCGCCGA ACCGCCGTCG GTGACCTGAC GCTGGAAGGC
GCGGTCACGC TCGAGCAGAT TGACGCACAG GCTGACGAAG CACGGCCGGG AATGCTCGCG
CCTGTTGACG CGCTGCTGCA ACGGTGCCCG CCGGTGCATC TCGATGCCGC CGCGATGGGG
CGCTTTCTGC AAGGCCAGCG CATCGCACGC CGCGATCTGC CGGAAGGGCA GGTGCCGCCG
GATGAGGGCA CGCTGGCACG TGTCTATGGC GACGAAGGGC GTCTGCTAGG CGTCGCGCGG
ATGAAGGAAG GGGCCTTGCG GCCCGAGCGG CTAGTCAAAC TCTAG
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| Protein sequence | MTDSSATRPP RLPRRDVHGV LLLDKPLGLS SNDALVRAKR LLRANKAGHT GTLDPLATGL
LPLCFGEATK FSQDLLDADK TYEAKVRLGA TTTTGDAEGE IVVERLVTCD HDALDAAVAR
FTGEIEQVPP MYSALKKDGK PLYEYARAGQ TVERAARQVT IHAITLLDVD LPAAMFTMRV
TCSKGTYIRT LAEDVGEALG CGAHLIGLRR TAVGDLTLEG AVTLEQIDAQ ADEARPGMLA
PVDALLQRCP PVHLDAAAMG RFLQGQRIAR RDLPEGQVPP DEGTLARVYG DEGRLLGVAR
MKEGALRPER LVKL
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