Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1949 |
Symbol | |
ID | 4038754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2119836 |
End bp | 2121125 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637977332 |
Product | general substrate transporter |
Protein accession | YP_584097 |
Protein GI | 94310887 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCA CTACCCAGTC ACAACACGGA TTCCGCACCG TGTTCCGCGT TGTCAGCGGC AACTTCCTGG AAATGTACGA CTTCATGGTC TATGGCTTTT ACGCTGCAGC CATCGCCCGT ACGTTCTTTC CTTCGGATAA TGAATTCGCA TCGCTGATGC TCTCGCTGGC CACGTTCGGC GCGGGCTTCC TGATGCGACC ATTGGGCGCC ATCATCCTGG GCGCCTATAT CGATCACCAC GGGCGTCGCA AAGGCCTGAT CCTCACGCTG ATCCTGATGG CGGCCGGCAC GCTGCTCATT GCGGTAGTGC CAGGGTACGC GGCGATCGGC GTGGCCGCGC CGCTGCTAGT CCTGTTCGGA CGACTGCTGC AGGGCTTCTC CGCAGGCGTG GAACTGGGCG GTGTATCGGT GTATCTGTCC GAGATCGCCA AGCCCGGCAA GAAGGGCTTC TACGTGGCAT GGCAATCGGC CAGCCAGCAG GTAGCCGTGA TCTTCGCGGG CCTGCTCGGC GTGATCCTGC ACGCCACACT GGCGCCGGCG CAGATGGATA GCTGGGGCTG GCGTGTGCCG TTCCTGATCG GCTGCCTGAT CGTGCCGTTC CTGTTCATCA TCCGCCGCTC GCTCGAGGAG ACCGAGGAGT TCCGCACGCG CAAGCATCGT CCGAGCGTGA ACGAGATCTA TCGTTCGATG CTCGACAACT GGGGCATCAT CATCGCCGGC TGCATGATGG TGGTGATGAC CACGGTGTCG TTCTACATGA TCACCGCCTA CACGCCGACC TTCGGCAAGA CCGTGCTGAA GCTCGACGAC GTGGACAACC TGATCGTCAC GATGTGCGTC GGCCTGTCGA ACTTTATCTG GCTGCCGCTG ATGGGCGCGG TGTCCGACCG CATTGGCCGC AAGCCGCTGC TGGTGTTCTT CACGATCGCC ACGCTGGTGA CCGCCTACCC CGCCGTTTCG TGGCTGGTGG CCGCCCCGTC GTTCGAACGC CTGCTGATGG TGGAGCTGTG GCTCTCCTTC CTGTACGGCA GCTATAACGG CGCAATGGTC GTCACGCTGA CCGAAGTCAT GCCGCCCGCC GTGCGCACCG CCGGCTTCTC GCTGGCATAC AGCCTGGCCA CGGCACTGTT CGGCGGCTTT ACGCCAGCGA TCTCGACCTA CCTGATCCAC GCCACGGGCA ACAAGGCCGC GCCGGGTCTG TGGCTGATGT TCGCCGCCGC ATGCGGTCTG GTTGCCACGA TCATCATCTT CCGCACACGT CGCGAGCAGT CCGCGCTGAG CGCCGCATAA
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Protein sequence | MSSTTQSQHG FRTVFRVVSG NFLEMYDFMV YGFYAAAIAR TFFPSDNEFA SLMLSLATFG AGFLMRPLGA IILGAYIDHH GRRKGLILTL ILMAAGTLLI AVVPGYAAIG VAAPLLVLFG RLLQGFSAGV ELGGVSVYLS EIAKPGKKGF YVAWQSASQQ VAVIFAGLLG VILHATLAPA QMDSWGWRVP FLIGCLIVPF LFIIRRSLEE TEEFRTRKHR PSVNEIYRSM LDNWGIIIAG CMMVVMTTVS FYMITAYTPT FGKTVLKLDD VDNLIVTMCV GLSNFIWLPL MGAVSDRIGR KPLLVFFTIA TLVTAYPAVS WLVAAPSFER LLMVELWLSF LYGSYNGAMV VTLTEVMPPA VRTAGFSLAY SLATALFGGF TPAISTYLIH ATGNKAAPGL WLMFAAACGL VATIIIFRTR REQSALSAA
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