Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1899 |
Symbol | |
ID | 4038703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2067195 |
End bp | 2068907 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637977281 |
Product | pyruvate dehydrogenase (cytochrome) |
Protein accession | YP_584047 |
Protein GI | 94310837 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGA AAGTTGCGGA GATCATCGTA GAGGTACTCG AACAGGCTGG CGTCAAGCGC TGCTATGGCA TTGTCGGCGA CACCCTCAAC CTGATTGCCG AACACCTCGA TCGAAGTTCC ATCGACTGGG TCGGTGTTCG TCACGAAGAA GCGGGCGCCT TCGCGGCAGG CGCTGAGGCG CTATACACCA ACAACCTGAC AGCGTGCGCC GGAAGCTGCG GCCCAGGCAG TCTGCACTTC ATCAACAGCC TGTACGAGGC CAATCGCAAT CGCGCTCCGG TTGTCCTGAT CGCCAGTCAG GTAGCGATGA GCGAGATGGG CTTCGAGTTC ATTCAAGAGG TGGATTTCAA GTCGGTCTTC AAGGAATGCT CGGTGTTTTG CGACATGATC CTGACGCCCG AACAGGCCCG CAGGAAAACC GCGATGGCCT GTCAGACCGC ACTGACCAGG CGCGGCGTTG CCGTGTTGAT CGTGCCGGTG GACATTTCAC ATGGCGAAGT GAAGGAGGAC TTCCCTTATC GCGTTCACCA CAGTCGTCCA TCCATCCGGC CGAATGACGC GGAGATCGGA GCCATCGCAG AGGTCCTGAA TGCCGGCAGG AAGACTGCCA TTTATGCGGG GTCCGGCTGC GAGCAGGCGC TCGCCGAGAT CATGGCCGTC GCGGAAAGGC TTAAGGCGCC GGTCGCCCAT ACCTCGCGCG CGAAGAACTG GCTCGAACCG GGCAATCCGT ACAACATCGG CATGACGGGC ATCCTGGGGA ACGAAGCCGG CTATAACGCG GTGCTCGAAT GCGACACGCT GCTGTTGCTC GGCGCGGATT TTGCGTGGCG CCAGTTCTAT CCCGATGGGG CAAAGATCGT GCAGATCGAC ATCGACCCAA CGCATCTGGG CCGACGCCAC CCCATCACGC TGGGCGCGGT AGGCGACATC CAAACTACGC TGCAGGCATT GCTGCCGCAT CTGGACCAGC ACGAGGACGC GTCATTCCAG GAGAAATACA TCAAGCGTTA TGCCGAAGCG ATGGTAGCGG CAAGGAAGCC TCTCATCCCG GGCCACAACG ACAGCATTCC CGGCTCGTAC CTCGCGTCAA TCATCGACAA GCACGCCGCC GACGATGCGC TGATCTGCGC TGACGATGGC AGTCCGATCG TGTGGGCGTT GCGTCTGTTC GACGCCAACG GCAAACGCCA GATCTTCGGC AGCCTCCTGC ACGGCACCAT GGCGAGCGCC TTGCCCAGCG CACTGGGCCT GCAGAAGGCA TGCCCCGATC GCGAGGTCAT CGCCATGTGC GGCGACGGCG GCATTACGAT GCTGTTCGGC GAACTGCTCA CCACGATCCA GGAAGAGGTG CCCATCAAGA TCGTGGTGTT CGACAACAGC AAGCTTGGCT TCGTGGAGAT CGAGCAGAAG GCCGAGGGCA TGCTCGACAC CTTTACGAAA CTGAAGAACC CAGACTTCGG CAAGGTGGCG GAGGCCATCG GCCTCTGGGG CAAGACGGTG CGCAAGGCCT CTGAGCTGGA CGCGTCGGTG CAGGAGTGGC TGTCGCAACC CGGCCCTGCG CTTCTCAATG TCATCGTCAA TCCGCTGGAA CTGGTCAAGC CACCCTTCCT GGAAGCCGGC CCCGTGATCG GCATGGCGAT GTACTCCGTG CGCGCCATCC TCAACGGACG CGGCGCGGAT GTACTGGAAA TGGTGCGCGA GAACTTCCGC TGA
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Protein sequence | MGKKVAEIIV EVLEQAGVKR CYGIVGDTLN LIAEHLDRSS IDWVGVRHEE AGAFAAGAEA LYTNNLTACA GSCGPGSLHF INSLYEANRN RAPVVLIASQ VAMSEMGFEF IQEVDFKSVF KECSVFCDMI LTPEQARRKT AMACQTALTR RGVAVLIVPV DISHGEVKED FPYRVHHSRP SIRPNDAEIG AIAEVLNAGR KTAIYAGSGC EQALAEIMAV AERLKAPVAH TSRAKNWLEP GNPYNIGMTG ILGNEAGYNA VLECDTLLLL GADFAWRQFY PDGAKIVQID IDPTHLGRRH PITLGAVGDI QTTLQALLPH LDQHEDASFQ EKYIKRYAEA MVAARKPLIP GHNDSIPGSY LASIIDKHAA DDALICADDG SPIVWALRLF DANGKRQIFG SLLHGTMASA LPSALGLQKA CPDREVIAMC GDGGITMLFG ELLTTIQEEV PIKIVVFDNS KLGFVEIEQK AEGMLDTFTK LKNPDFGKVA EAIGLWGKTV RKASELDASV QEWLSQPGPA LLNVIVNPLE LVKPPFLEAG PVIGMAMYSV RAILNGRGAD VLEMVRENFR
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