| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1876 |
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| Symbol | |
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| ID | 4038678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2036536 |
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| End bp | 2037846 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977256 |
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| Product | TRAP dicarboxylate transporter subunit DctM |
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| Protein accession | YP_584024 |
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| Protein GI | 94310814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00220831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG TTCTCGTTGC CCTGATCCTG CTGCTGGTGA TGATCGCCTT CCTGGCGATC
GGCGCGTGGA TTCCCGTGGC GATCGCCGTG ACCTCGTGGG TCGGCCTGGT GATCTTCTCC
GACCACGACG CGCTGGTTAA CCTGGCCAAC TCCTGGTGGT CGTCCAGTGC CTCCTACACG
CTGGCATCGC TGCCCCTGTT CGTGTGGATG GGAGAAATCC TGTTCCGCAC CAAGCTCTCC
GAGCAGATGT TCAATGGCCT CTCCCCGTGG CTCAACTGGC TGCCGGGCCG TCTCATGCAC
GTCAACATTC TCGGCTGCGG CATCTTCGGT TCGGTGTCGG GGTCGTCGGC GGCCACCTGC
GCCACGATCG CCAAGTCGGC ACTGCCCGAA CTGACCCGAC GCGGCTACGA CGAGCGCATC
ACACTCGGCT CGCTGTCGAC GGCGGGCACG CTGGGCATTC TGATCCCGCC ATCGATCACG
ATGGTCGTGT ATGCGGTGTC CGCCGACGTC TCCATCATCC GCGTGTTCCT CGCCGGGTTC
CTGCCGGGCC TGTTACTGAT GATCCTGTTT TCGGGATACA TCGTGGTCTG GGCGCTGATG
AATCCTGAGA AGACCCCTGC GGCCGAGACG TTCGGCTGGT CGGCCCGGCT CGCGTCGATC
CGGCAGCTCA TGCCCTGCAT CATCCTGATC GCGTTCATCA CGTGGATCAT GATGGCCGGG
TACTCGACGG CTACCGAGGC TGCCGCGTAT GGCGTGGTGG CATCGCTCGC GCTGGCCTGG
GCAGGCGGCT CGCTGACGCG CAAGGCATTC TGGGAGAGCC TGATGTCGGC CACCCGGCTG
ACCGCGATGA TCATGTTCGT GCTCGGGGCG ACGTCATTTC TGTCGGTCAC GATGAGTTTC
ACCGGCATTC CGCGCGCACT GGCCGAATGG GTGGCGGCGC TGCACCTGTC GCCGTGGGCG
CTGATCGCCG TCCTGACCAT CATCTATATC CTGCTCGGCA CGGCACTCGA CGGCATCTCG
ATGATCGCGC TGACCACGGC CACCGTCCTG CCGATGGTAC AGGCCGCCGG CTTCGATCTG
GTATGGTTTG GCATCTTCAT CGTGCTGCTG GTGGAAATCG CCGAGGTCAC GCCACCCGTC
GGATTCAACT TGTTCGTGCT CCAGAGCATG ACCGGCAAGG ACAGCAACTA CATCGCCAGG
GTGTCGTTGC CGTTCTTCAT GATGATGGTG CTGGCGATCG GCATCATCAC CGTGTGGCCC
AGCGTGGTGA CATGGCTGCC AGACGTGGTC ATGGCGAAGG AGCTCAAATA G
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| Protein sequence | MSTVLVALIL LLVMIAFLAI GAWIPVAIAV TSWVGLVIFS DHDALVNLAN SWWSSSASYT
LASLPLFVWM GEILFRTKLS EQMFNGLSPW LNWLPGRLMH VNILGCGIFG SVSGSSAATC
ATIAKSALPE LTRRGYDERI TLGSLSTAGT LGILIPPSIT MVVYAVSADV SIIRVFLAGF
LPGLLLMILF SGYIVVWALM NPEKTPAAET FGWSARLASI RQLMPCIILI AFITWIMMAG
YSTATEAAAY GVVASLALAW AGGSLTRKAF WESLMSATRL TAMIMFVLGA TSFLSVTMSF
TGIPRALAEW VAALHLSPWA LIAVLTIIYI LLGTALDGIS MIALTTATVL PMVQAAGFDL
VWFGIFIVLL VEIAEVTPPV GFNLFVLQSM TGKDSNYIAR VSLPFFMMMV LAIGIITVWP
SVVTWLPDVV MAKELK
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