| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1855 |
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| Symbol | |
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| ID | 4038657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2009402 |
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| End bp | 2011483 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977235 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase |
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| Protein accession | YP_584003 |
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| Protein GI | 94310793 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.202152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.373323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGC AGTATCAGGT TCAGGACGGC GTAGCCGTCA TCACACTCGA CAATCCCCCC
GTCAACGGCC TCGGTCACAG CACCCGCCTT GGCATCGTCG AAGGCTTGAC CCGTGCGCTG
GATGACGCGG CCGTCAAGGC AGTGGTCATT ACCGGCGCCG GCAAGGCTTT CTCGGGCGGC
GCCGACATCC GCGAATTCAA CACGCCCAAG GCCACGCAGG AGCCGACGCT GCACTCGGTG
ATCCGCGCCC TGGAAGCCTC CACCAAGCCG ATCGTGGCGG CAATTCACTC GGTCGCCATG
GGTGGCGGCC TGGAACTGGC GCTGGGCTGT AACTATCGCG TGGCCGCCAA GGGCGCCCAG
ATCGCGCTGC CGGAAGTCAA GCTCGGCCTG CTGCCGGGCG CTGGTGGCAC GCAACGCCTG
CCGCGTCTGA TCGGCCTGGA GCACGCGCTG AACATGATCG TGTCCGGCAC CGCGATTCCG
TCGGAGAAGT TCGCCGGTTC GAAGCTGTTC GACGAGATCG TCGATGGCGA CGTGCTGCCT
GCCGCCGTCA AGTTCGCCCA GAGCGTGGCT GCCGCGCCGG GACCGTACCC GAAGGTGCGC
GACCTGAAGG TGCGCCACGA GAACGCCGAA GGCTTCCTGG CCTTCGCCCG TAATACCGTG
GCTGCCGTGG CCAAGAATTT CCCGGCCCCG CTGAAGTGCG TGGATGCCGT GGCGGCTTCG
CTGAAGCCGT TCGAGGCTGG CCTGAAGGAC GAGCGTGATG GCTTCATGTA CCTCGTCGGC
ACGCCGGAAT CGCGCGCGCT GCGTCACGCC TTCTTTGGCG AGCGCGCCGC CAGCAAGATC
CCCGATGTGC CCGAAGGCAC CCCGGTGCGC AAGATCGAAC GCGTTGCCGT GATCGGCGCC
GGCACGATGG GTGGCGGCAT TACGATGAAC TTCCTGAACG CCGGCATCCC CGTGACGATG
CTGGAAATGA AGCAGGAAGC GCTGGAGCGC GGCGTGGCCA CGATCCGCCG CAACTACGAG
AACAGCGCCA AGAAGGGCAA GCTGACGCAG GAGAAGGTCG AGCAGCGCAT GGGCCTGCTG
ACCACCACGA TGTCCTATGA CGACATCAAG AACGCCGACC TCGTGATCGA GGCCGTGTTC
GAAGAAATGG GCGTCAAGGA AACCGTCTTC AAGAAGCTGG ACGAAGTGAT GAAGGACGGC
GCGATCCTGG CCTCCAATAC CTCCACGCTG GACGTCAACA AGATTGCCTC GTTCACGCGT
CGTCCGCAGG ACGTGGTCGG CATGCACTTC TTCAGCCCGG CCAACGTGAT GAAGTTGCTG
GAAGTCGTGC GCGGCGAGAA GACCGGCAAG GACGTGCTGG CCACCGTCAT GCAGATCGGC
AAGAAGATCA AGAAGACGGC CGTGGTGTCG GGCGTTTGCG ACGGCTTCAT CGGCAACCGC
ATGATCGAGC AGTACAGCCG CCAGGCCGGC TACCTGCTGG ACGAAGGCGC GCTGCCCGAG
CAGGTGGACA AGGCCATCGA GAAGTTCGGT TTCGCGATGG GCCCGTTCCG TATGGGCGAT
CTGGCTGGCA ACGACATCGG CTGGGCGATC CGCAAGCGCC GCGCCGTGGA CAAGCCGGAC
ATCCAGTACT CGAAGACGGC GGACAAGCTC TGCGAGATGG GCCGCTTCGG TCAGAAGACC
GGCGCAGGCT GGTACGACTA CAAGGCTGGT GATCGCAAGC CGTACCCGAA CAAGCAGGTC
AACGACATGA TCGTCGAGCA CTCGAAGGAG CTCGGCATCA CGCGCCGCAA GATCTCGGAT
GAGGAAATCG TCGAACGTCT GGTGTTTGCA CTGGTGAACG AAGGCGCCAA GATCCTGGAG
GAGGGCATTG CCTCGAAGGC GTCGGACATC GACATGGTCT ATCTGACCGG CTACGGCTTC
CCGCTGTTCC GTGGTGGCCC GATGCTGTAC GCGGACCAGG TCGGCTTGTA CAACGTGGCC
CAGTCCATGA AGCGCTATGC CAAGGGTTAC CACGGCGAAG CGTGGGTGGT GGCGCCGCTG
CTGCAGAAGC TGGCAGACGA GGGCAAGGGC TTCAACGGCT GA
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| Protein sequence | MTAQYQVQDG VAVITLDNPP VNGLGHSTRL GIVEGLTRAL DDAAVKAVVI TGAGKAFSGG
ADIREFNTPK ATQEPTLHSV IRALEASTKP IVAAIHSVAM GGGLELALGC NYRVAAKGAQ
IALPEVKLGL LPGAGGTQRL PRLIGLEHAL NMIVSGTAIP SEKFAGSKLF DEIVDGDVLP
AAVKFAQSVA AAPGPYPKVR DLKVRHENAE GFLAFARNTV AAVAKNFPAP LKCVDAVAAS
LKPFEAGLKD ERDGFMYLVG TPESRALRHA FFGERAASKI PDVPEGTPVR KIERVAVIGA
GTMGGGITMN FLNAGIPVTM LEMKQEALER GVATIRRNYE NSAKKGKLTQ EKVEQRMGLL
TTTMSYDDIK NADLVIEAVF EEMGVKETVF KKLDEVMKDG AILASNTSTL DVNKIASFTR
RPQDVVGMHF FSPANVMKLL EVVRGEKTGK DVLATVMQIG KKIKKTAVVS GVCDGFIGNR
MIEQYSRQAG YLLDEGALPE QVDKAIEKFG FAMGPFRMGD LAGNDIGWAI RKRRAVDKPD
IQYSKTADKL CEMGRFGQKT GAGWYDYKAG DRKPYPNKQV NDMIVEHSKE LGITRRKISD
EEIVERLVFA LVNEGAKILE EGIASKASDI DMVYLTGYGF PLFRGGPMLY ADQVGLYNVA
QSMKRYAKGY HGEAWVVAPL LQKLADEGKG FNG
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