| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1854 |
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| Symbol | |
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| ID | 4038656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2008700 |
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| End bp | 2009365 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977234 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_584002 |
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| Protein GI | 94310792 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.130267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.175383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTATG GCGCGCAGGA TTGCCTGCTG GTGATCGATG TGCAGAACGA CTTCATGCCG
GGGGGCGCGC TGGCCGTGCC GCGCGGCGAT GAAGTCGTGC CGATCATCAA CCGGTTGGCG
CCGGCATTCG AGCACGTGGT GCTGACGCAG GACTGGCATC CCGCCGGTCA TGTGTCCTTC
GCAACGAGCC ATGTCGGTAC CGCGCCGTTC CAGACCATGA TGTTGCCGTA TGGCGAGCAA
GTGCTGTGGC CCGATCACTG CGTGCAGGGC ACGCCCGGCG CCGCGCTGCA TGCAGACCTG
CGCATCCCGC ACGCGCGGAT GGTGATCCGC AAGGGTCACC ACGCCAACGT GGACAGCTAC
AGCGCGTTCA TGGAGGCGGA CCGCGCGACG AAGACCGGAC TGGCTGGCTA CCTGCGCGAG
CAGGGCGTTC GCCGGGTGGT CTGCGTCGGG TTGGCAACGG ATTACTGCGT GGCCTGGACC
GCGCTCGATG CGCGCGCAGC GGGCTTCGAG GCGGTGGTCG TGGAAGATGC CTGCCGCGCG
ATCGATCTGA ACGGATCGCT CGACCGGGCA TGGCGAGAAC TGGCTGCGGC CGGTGTTCGT
CGTACGACTG CCGATGCACT GCGGTCTGGT GCTGGTACGC ACAATCCCTG GCTCCCTGAG
TCCTGA
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| Protein sequence | MAYGAQDCLL VIDVQNDFMP GGALAVPRGD EVVPIINRLA PAFEHVVLTQ DWHPAGHVSF
ATSHVGTAPF QTMMLPYGEQ VLWPDHCVQG TPGAALHADL RIPHARMVIR KGHHANVDSY
SAFMEADRAT KTGLAGYLRE QGVRRVVCVG LATDYCVAWT ALDARAAGFE AVVVEDACRA
IDLNGSLDRA WRELAAAGVR RTTADALRSG AGTHNPWLPE S
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