| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1836 |
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| Symbol | |
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| ID | 4038638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1990354 |
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| End bp | 1991622 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977216 |
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| Product | type III effector Hrp-dependent protein |
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| Protein accession | YP_583984 |
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| Protein GI | 94310774 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0425276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0754586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC CTCTGCTCGG CTGTATCGCC GACGATTTCA CCGGCGCCAC GGATCTGGCC
AACACGCTAG TCCGCAATGG CATGCGGACC GTGCAGACGA TCGGCGTGCC GGCGTCCGCC
GTGGAAGCCG ATGCCATCGT CGTGGCACTG AAATCGCGCA CGATCCCGGC CAGCAACGCG
GTGGCGCAGT CGCTCGCCGC ACTGCGCTGG CTGCGCGAAC AAGGCTGCCG CCAGTTCGTG
TTCAAGTACT GCTCGACGTT CGACTCCACC GACGCCGGCA ATATCGGCCC CGTGGCCGAA
GCCCTGCTCG ACGCGCTCGG CAGCGACTTT ACGATTGCCT GCCCGGCCTT TCCGGAGAAC
GGCCGCACGA TCTTCCGCGG CCATCTGTTC GTGGCGGACG CGCTGCTCAA CGAATCGGGC
ATGGAGCACC ATCCGCTTAC GCCGATGACC GACGCCAACC TCGTGCGGGT GTTGCAGGGC
CAGAGCCAGG CCAAGGTCGG TCTGTTGCGC TACGACACCG TCGCGCAGGG CGCAAATGCC
GTGCGCGCGC GCATTGACGC GTTGCGTGGC GAGGGCGTGA AGCTGGCGAT CGCCGATGCC
ATTTCCGATA CCGACCTGTT CGCGCTGGGC GAAGGTTGCG CCGCGCTGCC GCTGATCACG
GGCGGCTCGG GCATCGCGCT GGGCCTGCCC GAGAACTTCC GTCGCGCCGG ACTGCTACCT
GCGCGCACCG ACGCCGCAGA AGTCCCGCCC GTGCATGGTC ATGGCGTGGT GCTGGCGGGC
AGCGCATCGC GTGCCACGAA CGGCCAGGTG GCGCACTGGA TCGCGCAGAA GCGCCCCGCC
CTGCGGATCG ATCCTCTGCG TCTGGCGCGT GGAGACACGG TCGTGGAGAA CGCACTGGCC
TTCGCGGGCA ATCACGACGA GCCGGTGCTG ATCTATGCCA CCGCCCAACC CGATGAAGTC
AAGGCCGTGC AGGCCGAACT CGGCGTCGCA CGCGCGGGCG AGTTGGTCGA GCACGCGCTG
GCGAGCATCG CCGCCAGCCT CAAGGCACGC GGCACGCGGC GCTTCGTGGT GGCCGGCGGC
GAAACCTCCG GTTCCGTGGT GCAGGCGCTG GGCGTGCAGT CGTTGCGTAT CGGTCCGCAG
ATCGCGCCAG GCGTGCCGGC GACGGTCACG CTGGACGATG CGCCGCTGGG ACTGGCACTG
AAATCCGGCA ACTTCGGCGG CGAGAACTTC TTCGATGAAG CGCTGCAAGC GCTGGGAGCA
CCGCAATGA
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| Protein sequence | MNRPLLGCIA DDFTGATDLA NTLVRNGMRT VQTIGVPASA VEADAIVVAL KSRTIPASNA
VAQSLAALRW LREQGCRQFV FKYCSTFDST DAGNIGPVAE ALLDALGSDF TIACPAFPEN
GRTIFRGHLF VADALLNESG MEHHPLTPMT DANLVRVLQG QSQAKVGLLR YDTVAQGANA
VRARIDALRG EGVKLAIADA ISDTDLFALG EGCAALPLIT GGSGIALGLP ENFRRAGLLP
ARTDAAEVPP VHGHGVVLAG SASRATNGQV AHWIAQKRPA LRIDPLRLAR GDTVVENALA
FAGNHDEPVL IYATAQPDEV KAVQAELGVA RAGELVEHAL ASIAASLKAR GTRRFVVAGG
ETSGSVVQAL GVQSLRIGPQ IAPGVPATVT LDDAPLGLAL KSGNFGGENF FDEALQALGA
PQ
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