Gene Rmet_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1805 
Symbol 
ID4038607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1957453 
End bp1958451 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID637977185 
Producthypothetical protein 
Protein accessionYP_583953 
Protein GI94310743 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein
[TIGR03476] putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.13446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGTG CAGCATTCCT CCTGTTCTCG ATCGGCGCGG CACTGTTCGT CGGTCTGCTT 
GCCTGGCAAG GCTTTGACGC GGTCACGACC ACGTTGATGT CCGCCGGGTG GGGCCTGGCC
GTGGTGGCCG CGTTCCATCT GCTCCCACTG TTGCTCGATG CCGGCGCCAT CGCCGTGCTG
CTGGACCGCA AGACCCGTCA TGGCACGTTC TGCAGCGCGC TGCGCGCCCG CTGGACCGGC
GAGTCGGTCA ACAGCCTGCT GCCAGCGGGC CAGATCGGCG GGCCGGTACT GATGGTGCGC
TACCTGTCCC ATCGCGGTGC GCGGATGCGC GACGCGGCGG CCGCCATCAC CGTCAGCACC
ACCACCCAGG CGCTCTCCCA GATGATCTTC GCGTTGCTCG GCATTCTGTT GTTCGGCGCG
CAGGGCAACC TGTCGGACCA GCGCACCCCG ATCATCGTCG TCACCGTCAT CCTGGCCGCC
TGCGTGCTGG TGTTCTGTGT GCTGCAGCGG CGTGGCATGT TTGGCCGCGT GCTGCGCATG
GCGGCCAAGG TCTTCGGCAA GCAGAACTGG GATGGCCTGG CCCTGCGCGC CGACGCCGTG
GATCAGGCGA TCCGCGAGAT GTATCGCGAT CGTCGCAAGG TAGCAATTAG CTTCCTGCTG
AACCTGGCTG GCTGGATCGC CGGTACCGGC GAGGTCTGGC TGATCCTGTA CTTCCTGGGA
CACCCAGTGG GCTGGCATGA AGCCCTTCTC CTGGAAAGCG TGGGCCAGGC AATCCGGGGC
GCGGCATTTG CCATCCCCGG CTCGCTTGGC GCGCAGGAAG GTGGCTATCT GCTGCTGGCG
CCACTGGTGG GCCTGCCGCC CGATGCCGCG CTGGCGCTGT CCTTGGCCAA GCGCGTGCGC
GAGCTGGTGC TTGGCATCCC GGGGTTGATT TATCTGCATT TCAGCGAGCG CAAGTTCCAG
CGCCGCCGCG CCAGGGCGGC GCTCCAAGGC ACCGACTAA
 
Protein sequence
MSRAAFLLFS IGAALFVGLL AWQGFDAVTT TLMSAGWGLA VVAAFHLLPL LLDAGAIAVL 
LDRKTRHGTF CSALRARWTG ESVNSLLPAG QIGGPVLMVR YLSHRGARMR DAAAAITVST
TTQALSQMIF ALLGILLFGA QGNLSDQRTP IIVVTVILAA CVLVFCVLQR RGMFGRVLRM
AAKVFGKQNW DGLALRADAV DQAIREMYRD RRKVAISFLL NLAGWIAGTG EVWLILYFLG
HPVGWHEALL LESVGQAIRG AAFAIPGSLG AQEGGYLLLA PLVGLPPDAA LALSLAKRVR
ELVLGIPGLI YLHFSERKFQ RRRARAALQG TD