| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1781 |
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| Symbol | |
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| ID | 4038583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1933159 |
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| End bp | 1934076 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977161 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_583929 |
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| Protein GI | 94310719 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0645498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA TCCAGATCGA CACCGTTCTG AACCGCATCG AGGAAGCCAC CGGCCAGCAC
GCCAATCCGC GCATCGCGGC CATCGTGCAT CGGATGGTGC GCGACCTGTT CCACATGATC
GAGGACCTGG ATATCCAGCC CGAGGAATTC TGGTCCGGCC TCAATTTCCT GGCCGAAGCC
GGCCGCTCGG GCGAACTGGG CCTGATCGCG CCGGGGCTCG GGTTCGATCA CTTTCTGGAC
CTGCGCATGG ACGAGGCCGA AAGCCAGGCA GGCATTGCCG GCGGCACGCC GCGCACGATC
GAAGGCCCGC TCTACGTGGC AGGCGCGCCG GTGGCGCAGC GCGAGGCGCG CCTGGACGAC
GGTACGGGCG AGGGCGAGGT GCTGGTGATG GAAGGGCAGG TCAAGGATGG CGCGGGGCAG
CCGCTGGCCA ATGCCGTGGT CGAGGTCTGG CACGCCAACG CACTCGGCAA CTACTCGTAC
TTCGACCCGA CGCAGAGCGC GTTCAATCTG CGTCGCAGTA TCGTGACCGA TGGCCAGGGC
CGCTATCGCT TCCGCAGCAT CATGCCGGTG GGCTACAGCG TGCCGCCGAA TGGGGCAACG
GACCGTCTGC TCAAGCAGCT CGACCGCCAC GGCACCCGCC CGGCGCATAT CCATTTCTTC
GTCTCGGCGC CGGGCCATCG CAAGCTGACC ACGCAGATCA ACATCGATGG CGATCCGTAC
CTGTGGGATG ACTTCGCTTT TGCCACACGC GAAGGGTTGG TACCGCCGAT CACGCGCGTG
AGCGATGCGG CGGCAATGGC TGCGCTGGGC GTGGACAAGC CGTTTGCGTC GATCCGCTTC
GACTTCACGC TTCACGCGGA CCAGGCAGAT GCCCCGCAGG CCGAGGTGGC GCGACAGCGG
GCATCGGTGG CGGCCTGA
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| Protein sequence | MDKIQIDTVL NRIEEATGQH ANPRIAAIVH RMVRDLFHMI EDLDIQPEEF WSGLNFLAEA
GRSGELGLIA PGLGFDHFLD LRMDEAESQA GIAGGTPRTI EGPLYVAGAP VAQREARLDD
GTGEGEVLVM EGQVKDGAGQ PLANAVVEVW HANALGNYSY FDPTQSAFNL RRSIVTDGQG
RYRFRSIMPV GYSVPPNGAT DRLLKQLDRH GTRPAHIHFF VSAPGHRKLT TQINIDGDPY
LWDDFAFATR EGLVPPITRV SDAAAMAALG VDKPFASIRF DFTLHADQAD APQAEVARQR
ASVAA
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