Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1738 |
Symbol | |
ID | 4038540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1883223 |
End bp | 1885199 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977118 |
Product | glycosyl transferase family protein |
Protein accession | YP_583886 |
Protein GI | 94310676 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0016739 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCCG AGTATCTCGA TGGCCGTATG CTCATGCAGA TCAATGCGGG CGCATTCCTG ATCGCGCTGC TCTGCCTGCG CGGCGACCGG CAGCGCACCC TGGACCGCTG GCTTTTCGGC GCCGCGGCCG GCGTGCTGCT GCTGGTCTAT TACGTATGGC GATTCACCGA CACCTTGCCG GAATGGCGCA TGGACTTCCC GAGCCTTTGG GCGCATGCGT TCTTCGGCTT CGAGAGCCTG ACCATCGCGT ACACGCTGAT CTCGATCGGC ATCATGACCC GCACGTCCGA TCACAGCGCC GAGGCTGACG CCGGCGAGAC CGCATTGCGA CGCGGGCGGG AAGCACCGCC GGTGGACATT TTCATCGCCA CGTACAACGA AGGCCTCGAC GTGCTCGAGA AGACCATCGT TGCCGCGCTG GATATCGACT ATCCGAACTT CCGGGTCTGG GTGCTCGACG ACACCCGTCG CGACTGGCTG CGCGAGTTCT GCGATCAGGT CGGGGCACGC TACGTGACCC GGCCCGATAA CGCCCACGCC AAGGCCGGCA ACCTGAACAA CGGCCTGCGG CACAGCGCGG AACTCGATGG CGGCGCGCCA TTCATCATGG TGCTCGACGC CGATTTCGCA CCCAACCGGA ACATCCTGCT ACGTATCGTT GGGCTGTTCG ACGATCCACA GGTCGGCGTG GTGCAGACGC CCCAGTTCTA CTACAACGCC GACCCGATCC AATACAACCT TCGCTCCACG GAGTGCTGGG TGGACGAGCA ACGCGCATTC TTCGATGTCA TGCAGCCGTC GAAGGACGCC TGGGGTACCG CGTTCTGCAT CGGCACATCG TTCGTCGTGC GCCGCGAGGC GCTGGACCGG ATCGGTGGTT TCCCGATCGG CACCGTGACG GAAGATATTC ACCTGACCTA CAAGCTGATG CCGCATGGCT ATATCACGCG CTGGCTCAAT GAGCGCCTGA GCGTGGGCCT GTCGGCAGAG GGCCTGCCTG AGTACATCAG CCAGCGCAGC CGCTGGGGAC TGGGCACGAT CCAGGTGGCG CTCACCGCCG ATGGGCCGCT GCGCGGACCC GGCTACACGT TGCGCGAACG CCTGCACTAT GTGCACGGGC TGCTGCACTG GTTGAGCCGC CCGTTCACGC TGATGCTGCT GGCCGGGCCG CTGCTGTACT GGTACTTCAA TGTGCCGACG CTGTACGGCG AGCCGCTGCA GTTCCTCGCG TTCGGCGTGC CGGCGTTGCT GCTCTACTGG GCCTATAGCA TCTGGATCAC AGGCGCGCGT GCGATGCCGA TCTTCACCGA GGTCACGCAG ATCGTGGCGG CCATGGCGGT TTCCGCAACG CTGGTCAGTG CCATCTTCAA ACCGTTCGGC AGGCCGTTCA AGGTCACGAA CAAGGGGCTG GACCGTTCAA AGCTGGTCGT CCACGGCAAG TTCGCCGCGT TCTATGGCGC ACTGTTTGTT CTGGCCGCCA TGGGCCTTGG GCGTGCCGTG GCCGCCGACG GCACGGCCAG CGGTGTGGTC TTCAACATCG GATGGACCGT GATCTCGATG GTCCTGTACC TGGCCTCGTT GCTGGTCTGT TTCGAGCTGC CCCGGCCGCG CAAGGAAGAA CGCTTTCCAC ACCGCGAGCG TGCCCGCCTT TGCATCTACG GCAGCGACGG CTTGCCACGT GAATTCGATG GCGTCACGCA GGACATGTCG TGCAACGGGA TCGGCCTGAT CAGCGATGCT GCCGGTCGGG TGGAAGCTGG CGCCACGGGC GCGGTCTGGC TCTCCGAACT GGGCTGGGTG ACCTGCCGCG TGGCGCGCAC GCAAGGCCAT CTGCTAGGCA TCGAACTGTT TCCGGACATG GCGGGACGCC ATCGGCTAAT CCGGATGCTG TTCGGCGAAC CGGCTCACAA CATCGCGCAC CGCGGCCGCC CGCGTGTGGC CATCGTGCAA TTGCTGCGTC GCGCATTTAC CGGATGA
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Protein sequence | MFAEYLDGRM LMQINAGAFL IALLCLRGDR QRTLDRWLFG AAAGVLLLVY YVWRFTDTLP EWRMDFPSLW AHAFFGFESL TIAYTLISIG IMTRTSDHSA EADAGETALR RGREAPPVDI FIATYNEGLD VLEKTIVAAL DIDYPNFRVW VLDDTRRDWL REFCDQVGAR YVTRPDNAHA KAGNLNNGLR HSAELDGGAP FIMVLDADFA PNRNILLRIV GLFDDPQVGV VQTPQFYYNA DPIQYNLRST ECWVDEQRAF FDVMQPSKDA WGTAFCIGTS FVVRREALDR IGGFPIGTVT EDIHLTYKLM PHGYITRWLN ERLSVGLSAE GLPEYISQRS RWGLGTIQVA LTADGPLRGP GYTLRERLHY VHGLLHWLSR PFTLMLLAGP LLYWYFNVPT LYGEPLQFLA FGVPALLLYW AYSIWITGAR AMPIFTEVTQ IVAAMAVSAT LVSAIFKPFG RPFKVTNKGL DRSKLVVHGK FAAFYGALFV LAAMGLGRAV AADGTASGVV FNIGWTVISM VLYLASLLVC FELPRPRKEE RFPHRERARL CIYGSDGLPR EFDGVTQDMS CNGIGLISDA AGRVEAGATG AVWLSELGWV TCRVARTQGH LLGIELFPDM AGRHRLIRML FGEPAHNIAH RGRPRVAIVQ LLRRAFTG
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