| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1737 |
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| Symbol | |
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| ID | 4038539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1881726 |
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| End bp | 1883219 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977117 |
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| Product | RND efflux system outer membrane lipoprotein NodT |
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| Protein accession | YP_583885 |
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| Protein GI | 94310675 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00746142 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA AGCCAACCTC CCTGATTCGC CCGCCGCGCT GGACCCCTGC CCTCCTCGTG
CCGCTGGCGC TTGCCGCCTG CTCGCTGGAA CCCACCTACC AACGTCCGGA GTCACCGGTA
CCGCAGGCTT ACCCGACCGG CCCTGCCTAT GAAAGCGCCA ACAAGGGGCC CGCGGGCCAG
GCGCGGCCGG ACCAGGCAAC GCCCGCCGCG AGCCTTGGCT GGGAGGACTT CTTTACCGAC
CCACGCCTGC GCACGCTGAT CGGGCTGGCG CTGGCGAACA ACCGTGACCT GCGTATCGCG
ACGCTGTCCA TCGATCAGGC GCGAGCGCAG TACCGGATCC AGCGTGCCGC GCAGTTTCCG
GCGATCAACG CCAATGCAGG CTTTGCCAGT ACTCGGCTGA ACAGCGATCT GCGCGCGCCC
GGACAGGACG CCGTGATCAA CTCCTGGACT GCGGGCGTAG GCTTCAATGC ATTTGAGCTC
GATGTGTTCG GGCGGGTGCG CAGCCTCAAG CATCAGGCGC TGGAGCAATA TCTGGCAATC
GAGGAAGTGC GGCGCAGCGC GCAGATCAGT CTCGTGGCGG AAGTGGCCAG CGCCTACCTG
ACATGGCAGG CCGACCAGGA ACTGCTCAGG CTGTCGAAGG AAACGCTCAA GGTCCAGCAG
GACGCCGCGC TGATGATCAG CCGCAGCAAG AGCGCCGGCG GCATGGCGGA GATCGACATG
CATCGCGGGC AGACCCAGGT GCAGACCGCG CAGGTGGATG TGGAGCAGTT CACGCGACAG
GTGGCGCAGG ACGAGAATGC GCTGGCGTTG TTGATCGGCG GCCAGCTACC GGCGGACCTG
CCGCCCCCGC AGCCGTTTGC GAATAACTCG TACGTGGCAG AGTTGCCCGC CGGGGTGCCA
TCGACACTGA TGGAGCAACG GCCAGACATC ATGGCGGCCG AGCATCAGCT CAAGGGGGCC
AATGCCAACA TCGGCGCGGC GCGGGCGGCC TTCTTCCCGC AGATATCGCT GACGGCCACC
GTCGGCGTGG CCAGCACGGC GCTCGCCTCG CTGTTCACGG GCGGCATGGC CTGGGCGTTC
GCGCCGCAGA TCACACTGCC GATTTTTAAC GCCGGGGCCA ACCAGGCACG ACTCGATATT
GCCACGGTGC AGAAGGACAT TAACGTGGCG GCTTACGAGA AAACGATCCA GGGTGCATTC
CGGGAAGTTG CCGATGGCCT GGCTGCACGC GGCACCTACG ACCGGCAGAC CGTGGCGCAG
GAGGCGCTGA CGAAGGAAGT TTCCGAAACC AAGCGGCTGG CGGAAATCCG TTTCAAGAAC
GGGGTGGATG ACTACTTCCC CGTGTTCGAT GCGCAGCGGC AACTCTACGA TGCGCAGAAG
AAGATGGTGA CGATCGAACT GGCCAGACTC ACCAGCCGCG CAAGCCTATA CAAGGCGCTG
GGCGGCGGGT GGTCGCAGCA GACGGTGGCC AGCCTAGATC ATCCGGCGAA GTAG
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| Protein sequence | MKRKPTSLIR PPRWTPALLV PLALAACSLE PTYQRPESPV PQAYPTGPAY ESANKGPAGQ
ARPDQATPAA SLGWEDFFTD PRLRTLIGLA LANNRDLRIA TLSIDQARAQ YRIQRAAQFP
AINANAGFAS TRLNSDLRAP GQDAVINSWT AGVGFNAFEL DVFGRVRSLK HQALEQYLAI
EEVRRSAQIS LVAEVASAYL TWQADQELLR LSKETLKVQQ DAALMISRSK SAGGMAEIDM
HRGQTQVQTA QVDVEQFTRQ VAQDENALAL LIGGQLPADL PPPQPFANNS YVAELPAGVP
STLMEQRPDI MAAEHQLKGA NANIGAARAA FFPQISLTAT VGVASTALAS LFTGGMAWAF
APQITLPIFN AGANQARLDI ATVQKDINVA AYEKTIQGAF REVADGLAAR GTYDRQTVAQ
EALTKEVSET KRLAEIRFKN GVDDYFPVFD AQRQLYDAQK KMVTIELARL TSRASLYKAL
GGGWSQQTVA SLDHPAK
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