Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1715 |
Symbol | |
ID | 4038518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1856503 |
End bp | 1857630 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977097 |
Product | AraC family transcriptional regulator |
Protein accession | YP_583865 |
Protein GI | 94310655 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.278486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAATCGC TGCATCCGGC TTTGCATTTC ATGCCAACAC GGCCTATCAT CCACGCCGAG TACGACGCGG CATGGTCCAG GGCACCCCGG GCACGTGACG CGCGAAAAAC AAGATGGGAG ACAAGCTTGA GAACACTGGT GCGCGCTGCG GCACTGACCA ATTTCTTCGA GGTGGCGGCG GCGGAAGGCC TGAACCCACA GCCCTTGCTC CGGCAGGCCG GATTGACACG CGCGCTGCTG ACCGATCCCG AGCAGCGGGT TCCGGTGGAC GCGTGCGCGG TATTGCTGGA GGCCGCGGCG GATGCATCGT CCTGCCTCAC CTTCGGGCTG CGCATGGCGG AGTCCCGGCA GTTATCGGAT TTCGGCCTGA TGAGCCTGCT GATCAGCCAG CAGCCCACGC TGCGTGACGC GCTCGACACG ATCATTCGTT ACCGTCACCT GGTCAATGAG TCCGTGGCAA TCATGGTGGA GTCGGCCGGC AAGGTGGTCA TGATCCGGCA GGAGGTGGTG CTCGGCGCGC CTTCCCGACA AGCCACCGAA CTGGCCCTGG GCGTGGTGTT TCGCTTGTGC CGCGCCCTGC TCGGCGCGCA TTGGCATCCA CTCAGCGTCA ACTTTACCCA TGCCGCGCCG CCCGACCTGC AGGTGCACCG CCGGTTGTTC GGATGCCCAC TGGAGTTCGG CAGCGAGTTC AGCGGCATTG TCTGCCTGGC GGCAGACCTC GACGCGCCAA ATCCGACCGG CGACCCGGCC ATGGCTCGCC ATGCGCAGCG ACTGGTGGAT ACCCTGCCCC GTGTGAACGA GGCGTCGATC GGGCGTGAAG TGCGCAATGC GGTGTACCTG ATGCTGCCAA TGGGTCGCGC CAGCTGCGAG GCCGTGGCCC AGGGGCTGGG CCTGAGCTTG CGGACCATGC AACGGCAACT CGACGAAGCC GGCGAATCGT TCACCGACAT CCTGAGCGAG GTGCGCCGCG ATCTGGCGCA GCGGTACGTC GGCAATCCGG ACTACTCCCT GCTACGCGTT TCGGAATTGC TCGGCTATGG TTCAGCCAGT TCCTTCACGC GATGGTTTTC CACCCAGTTC GGGGAAGCCC CCCTGGCATG GCGCCGGCGC CACAGTGTCA ACCGGTGA
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Protein sequence | MQSLHPALHF MPTRPIIHAE YDAAWSRAPR ARDARKTRWE TSLRTLVRAA ALTNFFEVAA AEGLNPQPLL RQAGLTRALL TDPEQRVPVD ACAVLLEAAA DASSCLTFGL RMAESRQLSD FGLMSLLISQ QPTLRDALDT IIRYRHLVNE SVAIMVESAG KVVMIRQEVV LGAPSRQATE LALGVVFRLC RALLGAHWHP LSVNFTHAAP PDLQVHRRLF GCPLEFGSEF SGIVCLAADL DAPNPTGDPA MARHAQRLVD TLPRVNEASI GREVRNAVYL MLPMGRASCE AVAQGLGLSL RTMQRQLDEA GESFTDILSE VRRDLAQRYV GNPDYSLLRV SELLGYGSAS SFTRWFSTQF GEAPLAWRRR HSVNR
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