| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1652 |
|---|
| Symbol | |
|---|
| ID | 4038455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1787449 |
|---|
| End bp | 1788147 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637977036 |
|---|
| Product | DNA-binding response regulator CreB |
|---|
| Protein accession | YP_583804 |
|---|
| Protein GI | 94310594 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC CAGCCGTACT TGTAGTGGAA GATGAATCAG CCATTGCGGA CACGATTCTG
TACGCCCTAC GCACGGAAGG TATGCAGGTC GAGACTTGCA CGCTGGGGAG TGAGGCATTG
GATCGCGTGC GATCACGACG CCCCGATCTC GTTATCCTCG ACGTTGGGCT GCCAGATATC
AGCGGTTTTG AGGTTTGCCG CTCGATGCGG ACGTTTTCGG ACGTTCCCGT CATCTTCCTG
ACTGCCCGGC ACGAGGAAAT CGACCGCATC GTCGGGCTCG AAATTGGCGC GGATGACTAC
GTGGTAAAGC CATTCTCGCC ACGTGAGCTT GCCGCTCGCG TGCGCGTGAT CCTCCGTCGC
GCCAAGGGCG CCAGCGACTC ACCCCACCCA TCGCCAATGG CCCAGGAGGA AGCCGATTTC
GTCCATGACA CCGACGGCGC CCGCCTGGCC TATCGTGGCC GATGGCTGGA CCTCACCCGC
TACGAATACC GCCTGCTGGC GCTTCTGGTG CAACACCCGG GGCGCATCTT CGCCCGCTCG
CAGCTCATGG ATCTGGTCTG GCACGATTCG CTCGATACGG TCGATCGTAC CGTCGACACG
CACGTCAAGA CGCTCCGAGC CAAGCTCCGC GAGATCGCCC CCGCTGGCGA CCCGATCCGG
ACCCATCGCG GCATGGGCTA CTCACTCGAA TCACGATAA
|
|---|
| Protein sequence | MKQPAVLVVE DESAIADTIL YALRTEGMQV ETCTLGSEAL DRVRSRRPDL VILDVGLPDI
SGFEVCRSMR TFSDVPVIFL TARHEEIDRI VGLEIGADDY VVKPFSPREL AARVRVILRR
AKGASDSPHP SPMAQEEADF VHDTDGARLA YRGRWLDLTR YEYRLLALLV QHPGRIFARS
QLMDLVWHDS LDTVDRTVDT HVKTLRAKLR EIAPAGDPIR THRGMGYSLE SR
|
|---|
| |