Gene Rmet_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1602 
Symbol 
ID4038405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1728558 
End bp1729835 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID637976986 
Productglyceraldehyde 3-phosphate dehydrogenase 
Protein accessionYP_583754 
Protein GI94310544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGTC TTCGCCGGTT CCAATATGAC ATCTGGAAAA TGACGCGCGC GATTCTGATA 
TCTGCATTGG CGCTGCTGGC TGCCGCCGCC GGATCTCCCG TTTATGGGCA GGCCCAGCCT
GAAGATCCGA GCCAATCTCA GACGCAAACG CAAACGGAAT CCACAAAACC GCCCGAATCC
GCCAAGCCGG CGGACCAGAT GCAACCTCCG GCAAAGAAGA AACTGACGTT CTTCGATCCG
GAAGACGGGA AGCTCGACAT GAGCGACTTC CTGCTCAATC ACAAGGGCGC GCTGCCGGTG
CCGACGATCA TCACCGAACC GGCGGTGGGT TACGGCTTTG GGCTCGGGCT GCTGTTTTTC
TCCGAATCCA TGGCGGATGC GGCCGCCGAG GCCCGGGCCA GTGGCAAGGG GCCGGCGCCG
CCGAATATCA CGGTGCTGGG CGGTGCCTAT ACCGATAACG GTACGTGGGC GGCCGGCTTC
GGGCATTTCC ACACCTGGGA TGGCGATCGC ATCCGTTATC TGGGCGGTAT CGGCAAGGTG
GACGCCAATC TCGAGTACTT CGGCGTCTCG AACCAGCCGC GATCCTATGA GCTGAGCGGC
TTCGCGCTGG TGCAGCAGTT GCTGATCCGG GTGGGCGACA CACACTGGTT CATCGGTCCG
CGCTACGTAT TTGCCGATAC GTCCGCAACG TTCAAGTTCG GCAATTCGGC GCAGGAACTG
GGTAGCTTCG AGCGCGACCA GCGTATCGGC AAGGGCGGTA TCGTCATCGA CTACGACTCG
CGCGACAACA TCTTCTATCC GAACAAGGGC AGCTACGCCG AACTGGAAGT GCAGTTCGCG
CGAGCCGGCT TCGGCAGCAC ACAGACGTTT GACATGTACA ACGCGCGTGG CTTCACGTGG
ATTCCGGTGG CCCGTACGCT GATTCTCGGC TTGCGTGGCG ATACGCGTTT CTCCACGGGT
GATGTGCCGT TCTACGCGCA GCCCTATGTG GACCTGCGCG GTGTGCAGAA GGGACGCTAT
CAGGACCGCA ATGCCGTGAT GACCGAAGTC GAACTGCGCT GGGACGTCAC GCCGCGCTGG
TCGCTGCTGG CGTTCTCCGG CGCGGGCAAG GCGTACGGAC GGTGGAACGA TTTCTCCGAT
GCGTCCACCG TGGTCAGCGT CGGTGGCGGT TTCCGCTACA TGATCGCCCG CAAGCTGGGC
CTGTCGATGG GTATCGACGT GGCGCACAGC CGTGACCAGA ATGCGTTCTA TATCCAGGTG
GGTAGCGCAT GGCACTAG
 
Protein sequence
MDRLRRFQYD IWKMTRAILI SALALLAAAA GSPVYGQAQP EDPSQSQTQT QTESTKPPES 
AKPADQMQPP AKKKLTFFDP EDGKLDMSDF LLNHKGALPV PTIITEPAVG YGFGLGLLFF
SESMADAAAE ARASGKGPAP PNITVLGGAY TDNGTWAAGF GHFHTWDGDR IRYLGGIGKV
DANLEYFGVS NQPRSYELSG FALVQQLLIR VGDTHWFIGP RYVFADTSAT FKFGNSAQEL
GSFERDQRIG KGGIVIDYDS RDNIFYPNKG SYAELEVQFA RAGFGSTQTF DMYNARGFTW
IPVARTLILG LRGDTRFSTG DVPFYAQPYV DLRGVQKGRY QDRNAVMTEV ELRWDVTPRW
SLLAFSGAGK AYGRWNDFSD ASTVVSVGGG FRYMIARKLG LSMGIDVAHS RDQNAFYIQV
GSAWH