Gene Rmet_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1580 
Symbol 
ID4038383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1701941 
End bp1702648 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID637976964 
ProductMOSC domain-containing protein 
Protein accessionYP_583732 
Protein GI94310522 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000909232 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.645323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGG TGATCAACAT CCCGATTGCC GCCGTACTGG CGGGCAGGGT AAAGCCGTTC 
GGCCCCAAAG GGGTCCCGAG CGGGATCGAG AAGACAGTGG TCAGCGGGTC GGTTCGCATC
ACGAAGCTCG GCTTGGATAT CGACGAGCAG GGCGATCCGA AGCATCACGG CGGCCCCGAA
AAGGCGCTGC ACCACTATCC GCGCGACCAC TATCCGGTCT GGCACGACAC GCTGGCAGCC
CATGGCGGTA ACGTCGACGT GCTGGATGCC CCGGGTGCCT TCGGCGAGAA CTTCAGCACG
CACGGTCTGA CAGAGGCGGA AGTCTGTATT GGTGACCGCT TCCGTGTCGG CACGGCGCTG
GTGGAAGTCT CGCAGGCCCG GCAGCCGTGC TGGAAGCTCA ATCATCGGTT CGGCTATGCG
GCCATGTCGC GCTCGGTGCA GGAACGTGGA CGCACGGGCT GGTACTACCG GGTGATCGAG
GAGGGGGAAG TGTCAGCCGG CGACAGGATT GTGCTGGTAG CGCGGCCTTA TCCGCAATGG
ACCCTGCAGC GGTTGCTGCA CGTGCTCTAC GTGGATCGCC TCAACGACAC GGCACTGGCC
GAGATGGCCG ATCTGGCGCC GCTGGCGGAA AGCTGGCGCA AGCTGGCCCG CCAGCGCGTG
GCGAGCCATG TCGTGGAGGA TATGGAGAAG CGGTTGGCCG GAGGCTAG
 
Protein sequence
MEAVINIPIA AVLAGRVKPF GPKGVPSGIE KTVVSGSVRI TKLGLDIDEQ GDPKHHGGPE 
KALHHYPRDH YPVWHDTLAA HGGNVDVLDA PGAFGENFST HGLTEAEVCI GDRFRVGTAL
VEVSQARQPC WKLNHRFGYA AMSRSVQERG RTGWYYRVIE EGEVSAGDRI VLVARPYPQW
TLQRLLHVLY VDRLNDTALA EMADLAPLAE SWRKLARQRV ASHVVEDMEK RLAGG