Gene Rmet_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1579 
Symbol 
ID4038382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1701213 
End bp1701941 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID637976963 
Productglutamine amidotransferase 
Protein accessionYP_583731 
Protein GI94310521 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00430853 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.871002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CCCATGCACC TCGCGGCCCG CGCCGCACCG ATGTGATCCA GCACGTGGGA 
TTCGAGCACG CCGGCGTGAT TGCCGATGCA GCCCGCGCGC GTGGTCACGA AATCCGCATG
TATCAGGCAG GCGTGGATGA CCTTGCACTG GTGCAGGATG ATCCAGCCGA TCTGCTTGTG
GTGCTCGGCG GCCCGATCGG GGTCTATGAG ACCGAAGCCT ATCCGTGGCT CGAAGCCGAG
ATCGCCGTCA TTCGTGACCG TCTTCATGCA CAGCGGCCAA TGATCGGTGC GTGCCTGGGT
GCGCAACTGA TTGCAGCCGC TGCCGGTGCG CGCGTGTATC CGGGCACGCG CGAAATCGGC
TGGGCGCCGA TCACGCCCAC GGAAGCTGGT CGGCGTTCAC CGCTGGCCGC GCTGGCCGAG
GCCGACTGGC AGGTGTTGCA CTGGCACGGC GATACCTTCG ACCTGCCCGC CGGCGCCGAA
CTGCTTGCCT CCACCGCTGC CACGCCGCAC CAGGCCTATG CCATCGGCTC GCATGTGCTG
GCGTTGCAGT TCCACCCCGA GGTCAAGCCG GGCGATATCG AAACCTGGCT GATCGGGCAT
ACGGTCGAAC TGGGGCGCGC CGGTATTGAT CCGCGCACGA TCCGTCGCCG TACCGGTGAA
ATCGGTGCCG TCGTCGCCAA TGCCGGTGAG CGGATGTTTA CACGGTGGAT GGAAGAGGCC
GGGGTTTGA
 
Protein sequence
MSDTHAPRGP RRTDVIQHVG FEHAGVIADA ARARGHEIRM YQAGVDDLAL VQDDPADLLV 
VLGGPIGVYE TEAYPWLEAE IAVIRDRLHA QRPMIGACLG AQLIAAAAGA RVYPGTREIG
WAPITPTEAG RRSPLAALAE ADWQVLHWHG DTFDLPAGAE LLASTAATPH QAYAIGSHVL
ALQFHPEVKP GDIETWLIGH TVELGRAGID PRTIRRRTGE IGAVVANAGE RMFTRWMEEA
GV