| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1559 |
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| Symbol | |
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| ID | 4038362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1680920 |
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| End bp | 1682188 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637976943 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_583711 |
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| Protein GI | 94310501 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.22325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACGACACCCC CGACCTTGCC GCGCCTTCGG CGGGCAAGGT GGCGCCCGAG
GCGGTGGCGC TGCGCGCCCA GCCGCGCCCG GTCACGCGCC TGAATCGGCG CACGCTGGCC
ATCCTCGTCG GCGGCCTGTC GGTCGCCGTG CTCGGGGCCA CGATCTGGTC ATTGCAGCCG
CACCGGCGTG GCGCGGGCGA GCAGACCGAG CTTTACAACG TGGATCGTGT CTCGAAGTCC
GAAGGGCTGG ACGGCCTGCC GGCCGACTAC TCGAAGCTGC CGCCGAAGGT GCCCGAGCTG
GGGCCGCCGC TGCCGGGCGA CCTCGGCCCG GCCATCGTGA ACTCGCAGCA GCCAGCCGTG
GCCGCCTACG CGGCCCCCGG CCACGATCCC AACGACGCCT TGCGCAAGGA AGCGGAGGCC
GCTGCGGCTT CGTCGGTGTT CTTCCGCTCG GGTGGTCAAG CCGCGGCCAC GGTGGCGCAG
GCAGCGCCGG GCGTACCTGG CGTGGCAAGC ACGCTCGCGG CCTTCGATCC GCTCGCCGCC
GGGCCGGCCT CGACGGCGGC CCAGCCCGCC GACCCGACCG CCGTGCAGAA CCGGCAAGAC
CAGAAAGAGG CGTTCCTGAA AGCCGGTTCT ACGGAAACCC GTAATTCCGG CAATCTGGCG
CTGCCGACGT CGCCGTATCA GGTCATGGCT GGAACGGTGA TCGCCGGGGC GCTGGTGACG
GGCATCAAGT CGGACTTGCC GGGCGACGTG ATCGCCACCG TCACGGAGCC GGTCTATGAC
ACGGCCACGG GCAAGTTCCT GCTGATCCCG CAGGGATCGC GCATCCTGGG CAAATACAAC
AGCCAGGTCA GCTATGGGCA GAGCCGCGTG CAAGTGGTGT GGAACCGCGT CATCCTGCCG
GACACGTCAT CGCTGACGCT CGACAACCTC GTGGGCACTG ACCCGGCCGG CTACGCGGGC
CTGGAAGACG ACGTGGACTG GCACTGGAAG CGCATCTTTG CCGGTGCGGT GCTGACGACG
CTGCTGGGCG TCGGCGCCGA GCTGGCCGCG CCGGAGAACC GCCAGGACGG CAACCGCATC
GTCATCGCCG GGCGCGACAG CGCCCAGGAC AGCATCAATC AGGTCGGGCA AGAGATCACC
CGGCGCAACA TGAACATCCA GCCGACGTTG ACGGCACGGC CGGGCTTGCC GGTTCGGGTG
ATCGTGGCGC GCGACCTCGT GTTGCGTCCT TACCAACCCA TGTTCTATCA GCTTGGAGGT
GCGCGATGA
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| Protein sequence | MSQDDTPDLA APSAGKVAPE AVALRAQPRP VTRLNRRTLA ILVGGLSVAV LGATIWSLQP
HRRGAGEQTE LYNVDRVSKS EGLDGLPADY SKLPPKVPEL GPPLPGDLGP AIVNSQQPAV
AAYAAPGHDP NDALRKEAEA AAASSVFFRS GGQAAATVAQ AAPGVPGVAS TLAAFDPLAA
GPASTAAQPA DPTAVQNRQD QKEAFLKAGS TETRNSGNLA LPTSPYQVMA GTVIAGALVT
GIKSDLPGDV IATVTEPVYD TATGKFLLIP QGSRILGKYN SQVSYGQSRV QVVWNRVILP
DTSSLTLDNL VGTDPAGYAG LEDDVDWHWK RIFAGAVLTT LLGVGAELAA PENRQDGNRI
VIAGRDSAQD SINQVGQEIT RRNMNIQPTL TARPGLPVRV IVARDLVLRP YQPMFYQLGG
AR
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