| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1551 |
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| Symbol | |
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| ID | 4038354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1673656 |
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| End bp | 1674039 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976935 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_583703 |
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| Protein GI | 94310493 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0214054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAGA TGACCATTCC TGCTTTCCGT TTTTCTGCAA ATCCGGCTTT GCGTCTTGCG
CGGCTGCGCT GCCTGGCCCG CCCTGCGGGG CAAGGGCTGC TGCTGGCCGC GCTGCTGCTG
TTCCTGGCCG GAACCGCGCA GGCCGCCGGC TCCTCGATGC CGTGGGAAGG CCCGCTGCAA
TCCATTCTCG AATCCATCCA GGGGCCGGTG GCGCGCATCG TCGCGGTCAT CATCATCATC
GCCACGGGCC TCGCGCTTGC GTTCGGCGAC ACGTCGGGCG GCTTTCGCAA GCTGATCCAG
ATCGTGTTCG GCCTGTCCAT CGCGTTCGCG GCTTCGAGCT TCTTCCTGTC GTTCTTCAGC
TTCTCCGGCG GGGCGGTCGT ATGA
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| Protein sequence | MTQMTIPAFR FSANPALRLA RLRCLARPAG QGLLLAALLL FLAGTAQAAG SSMPWEGPLQ
SILESIQGPV ARIVAVIIII ATGLALAFGD TSGGFRKLIQ IVFGLSIAFA ASSFFLSFFS
FSGGAVV
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