Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1444 |
Symbol | |
ID | 4038247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1566597 |
End bp | 1567130 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637976828 |
Product | outer membrane chaperone Skp |
Protein accession | YP_583596 |
Protein GI | 94310386 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0659855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0459599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT ACACTCCACT GGCGAAATCC CTGAGCGCGG CCGCGCTGGC CGCTGCGGCC TTGTGCGCGG CGGCCCCGGC GATGGCTCAG GAGGCGCGCA TTGCTGCGGT CAACTCGGAA CGTATCCTGC GCGATTCGCA GCCCGCGAAG GCCGCACAGG TCAAGCTTGA GCAGGAATTC TCCAAGCGTG ACCGTGAACT GCAGGATATG GCCCAGAAGA TCAAGGCCAT GGCTGACAAG CTCGACAAGG ACACAGCCGT GCTCGCCGAC TCGGACCGCC AGCGCCGTCA GCGCGAAGTG GCCGATCTCG ATCGCGAATT CCAGCGCAAG CAGCGTGAGT TCCGCGAGGA TCTGAACCAG CGGCGTAACG AGGAACTGGC ACAGGTGCTG GAGCGTGCCA ACCGCGTGAT TCGTCAGATC GCCGAGCAGC GCAAGTATGA TCTGATCGTT CAGGAAGCCG TTTACGTGAA TCCGCGCATC GACATCACCG ACGACGTGAT GAAGGCGCTG AACGCCGGCA GCACGGGCAA GTAA
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Protein sequence | MKIYTPLAKS LSAAALAAAA LCAAAPAMAQ EARIAAVNSE RILRDSQPAK AAQVKLEQEF SKRDRELQDM AQKIKAMADK LDKDTAVLAD SDRQRRQREV ADLDREFQRK QREFREDLNQ RRNEELAQVL ERANRVIRQI AEQRKYDLIV QEAVYVNPRI DITDDVMKAL NAGSTGK
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