Gene Rmet_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1444 
Symbol 
ID4038247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1566597 
End bp1567130 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID637976828 
Productouter membrane chaperone Skp 
Protein accessionYP_583596 
Protein GI94310386 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0659855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0459599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT ACACTCCACT GGCGAAATCC CTGAGCGCGG CCGCGCTGGC CGCTGCGGCC 
TTGTGCGCGG CGGCCCCGGC GATGGCTCAG GAGGCGCGCA TTGCTGCGGT CAACTCGGAA
CGTATCCTGC GCGATTCGCA GCCCGCGAAG GCCGCACAGG TCAAGCTTGA GCAGGAATTC
TCCAAGCGTG ACCGTGAACT GCAGGATATG GCCCAGAAGA TCAAGGCCAT GGCTGACAAG
CTCGACAAGG ACACAGCCGT GCTCGCCGAC TCGGACCGCC AGCGCCGTCA GCGCGAAGTG
GCCGATCTCG ATCGCGAATT CCAGCGCAAG CAGCGTGAGT TCCGCGAGGA TCTGAACCAG
CGGCGTAACG AGGAACTGGC ACAGGTGCTG GAGCGTGCCA ACCGCGTGAT TCGTCAGATC
GCCGAGCAGC GCAAGTATGA TCTGATCGTT CAGGAAGCCG TTTACGTGAA TCCGCGCATC
GACATCACCG ACGACGTGAT GAAGGCGCTG AACGCCGGCA GCACGGGCAA GTAA
 
Protein sequence
MKIYTPLAKS LSAAALAAAA LCAAAPAMAQ EARIAAVNSE RILRDSQPAK AAQVKLEQEF 
SKRDRELQDM AQKIKAMADK LDKDTAVLAD SDRQRRQREV ADLDREFQRK QREFREDLNQ
RRNEELAQVL ERANRVIRQI AEQRKYDLIV QEAVYVNPRI DITDDVMKAL NAGSTGK