Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1440 |
Symbol | |
ID | 4038243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1560659 |
End bp | 1561480 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637976824 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_583592 |
Protein GI | 94310382 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000100946 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCCTTA CCCGCGTCAT CACCGCCGTA TGCCTGTTGC TGTTGATCCT GCCGATCCTG TTCCTGGCGC CGCCGGCGGC ACTGGCGGGG CTGGTCGCCG TCATCGTGCT GCTGGGCGGC TGGGAGTTTG GTCGCCTGAT CGGGTTGCGC GGGGCCTGGC CCTATGTGTA CGCAGTAGCT TGCCTGCTGG TCCTGATCGG ATGGCATGAT GCGCCGCAGC GTGACGCGGT GACGTGGCTG CTGGAGGCGT CCCTGATTGC CTGGGGTGTG GCACTGGTGC TGATGGCGCG CGGCGTGCGA ACTGCCACCC CCGCGTTCAC GGCGCTAGGG GTCGTTCTGG GGCTGATCAT GCTGCCGGCC TTCGGTCACG CCGTCATGGT ACTTCGGGCT GCGGGCATTG GCGTGCTGCT GACGGCTGCC GTGCTGGTCT GGGCCGCCGA TATCGGCGCA TACTTCGTTG GCAAGGCCAT CGGCAAGCGC AAGCTGGCAC CCACGATCAG TCCGGGCAAG TCCTGGGAGG GTGCCATTGG CGGCTGGCTG CTGGCGATGA TCGTGGCGCT CTCGCTGGCC GCGACGCACA CGTTCGCCCC AACGTGGTAC TCGTTGGTTG CCGACAAGGG CGGGCTGCGC CTCGTGGTTA TCCTGACCAC GCTGCTGGTC GCGGCCAGTA TTGTCGGCGA CTTGTTCGAG TCGCTGCTCA AGCGCCAGGT CGGCATGAAG GACAGCAGCC GTCTGCTACC CGGCCATGGC GGGATCCTGG ACCGGATCGA TGCGTTGATC CCGGTGTTCC CGCTGGCGGC TCTGCTGCTC GCGTGGATCT GA
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Protein sequence | MLLTRVITAV CLLLLILPIL FLAPPAALAG LVAVIVLLGG WEFGRLIGLR GAWPYVYAVA CLLVLIGWHD APQRDAVTWL LEASLIAWGV ALVLMARGVR TATPAFTALG VVLGLIMLPA FGHAVMVLRA AGIGVLLTAA VLVWAADIGA YFVGKAIGKR KLAPTISPGK SWEGAIGGWL LAMIVALSLA ATHTFAPTWY SLVADKGGLR LVVILTTLLV AASIVGDLFE SLLKRQVGMK DSSRLLPGHG GILDRIDALI PVFPLAALLL AWI
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