Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1439 |
Symbol | |
ID | 4038242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1559846 |
End bp | 1560616 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976823 |
Product | undecaprenyl pyrophosphate synthetase |
Protein accession | YP_583591 |
Protein GI | 94310381 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000108865 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGCACA TCAGTTCGAC GCTAGGCGTT CCCGATACCA CCTATGTGCC TCGGCACGTT GCCATCATCA TGGATGGCAA CGGTCGCTGG GCGACGCAGC GTCATCTACC CCGTGTGGCC GGCCACAACC GTGGCCTGGA CGCAGTGCGC GAGATCGTGC AGGCGTGCGC CGCTCGTGGC GTGCAGTACC TGACGCTGTT TGCATTCAGT TCCGAGAATT GGCGCAGGCC CGCCGACGAG GTGTCATTCC TGATGCGTCT GTTCATGACC GCCTTGCGTC GCGAAGTGGT CAGGATGCAC GCCAACAATA TTCGCCTGCG TGTGGTCGGC GATCTCAGCC GGTTCAGCCC GCGCATCCAG CAGGCGATCA AGGATGCCGA GGCGCGCACG GAAGGCAATA CGGGCCTGAC CGTGACGATC GCCGCCAACT ATGGCGGCCG CTGGGACCTG CTCCAGGCGA TGCGCAAGAT GCTGGCGCGT TCGCCGTTGC TCGATTCGGA CGCGATCGAC GAGTCCGTTC TGGCGCCGCA TCTGGCTATG GCCTACGCGC CCGAGCCGGA CCTGTTCATC CGCACCGGCG GGGAGCAGCG CATCAGCAAC TTCCTGCTCT GGCAGCTTGC CTACACGGAG TTGTACTTCA CCGAAACGTT CTGGCCGGAT TTTGATGCCG CCGAGCTGGA CAAGGCCTTT GCCTCGTACC GTCAGCGCGA GCGGCGCTTC GGACGGACCA GCGCGCAGCT GGTGGCGCCA GGCCTGTCCG GTACAGCCTG A
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Protein sequence | MQHISSTLGV PDTTYVPRHV AIIMDGNGRW ATQRHLPRVA GHNRGLDAVR EIVQACAARG VQYLTLFAFS SENWRRPADE VSFLMRLFMT ALRREVVRMH ANNIRLRVVG DLSRFSPRIQ QAIKDAEART EGNTGLTVTI AANYGGRWDL LQAMRKMLAR SPLLDSDAID ESVLAPHLAM AYAPEPDLFI RTGGEQRISN FLLWQLAYTE LYFTETFWPD FDAAELDKAF ASYRQRERRF GRTSAQLVAP GLSGTA
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