| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1370 |
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| Symbol | |
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| ID | 4038173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1479578 |
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| End bp | 1480615 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976754 |
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| Product | ABC transporter substrate-binding protein, aliphatic sulphonates |
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| Protein accession | YP_583522 |
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| Protein GI | 94310312 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.759822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGC CCATCCGCAT CTCTCTTTTC CACAACTCGC TGCGCCGCCG TCTGCTGACC
GGTGTGCTGG TGGTTGCCAC CGGCCTTTCC TATGTGCTGT TTGCCGGGCC GGCCAAGGCC
CAGTCCCAGA CCGTCAATCC CAAGCTGCTG CGCATCGGCT ATCAGAAGTA CGGCACGCTG
ACGCTGCTCA AGGCGCGCGG TACGTTGGAA AAGCGTCTGG CGCCGCAAGG TATCACGGTC
AAATGGACTG AGTTCCCGGC TGGCCCGCAG TTGCTGGAGG GGCTCAACGT TGGCGCGATC
GATTTCGGCA CGGTCGGCGA AGCGCCGCCG ATCTTTGCCC AGGCCGCCGG CGCGCAACTG
GCCTACATCG GCAATGAGCC GCCCGCGCCC ACGGCGGAGG CCATCGTCGT GCCGAAGAAC
TCCACGATCA AGAGCGTGGC CGATCTGCGC GGCAAGCGCG TGGCGCTGAA CAAGGGCTCG
AACGTGCACT ACCTGCTGGT GCGCCAGTTA GAGAAAGCCG GGGTGGCCTA TGGCGAGATC
CAGCCCGTTT ACCTGCCGCC CGCCGATGCG CGTGCCGCCT TCGAGCGAGG CGCCGTCGAT
GCCTGGGTGA TCTGGGATCC GTTCCTCGCT GCTGCCCAGA AGCAGCTCGA TGCCCGTGTG
CTGGTCGATG GCCGTGGCGC GGATGGCAAG AACGTGGTCA GCAACCACCA GTTCTATCTG
GCGTCGCGCC CTTACGCGCA AGCGCGTCCC GAGGTGGTGA CTGCGATTCT CGATGAACTC
GCGCAACTGG GCCAATGGGC CGAGAAGCAT CCGAAGGACG CTGCTGCCGT GCTGGTCAAG
GAGACTTCGC TCGACCCCGG CGTGCTCGAT CTGGCCGTGT CGCGATTCTC GTACGGGGCG
AAGCCGGTCT CGCCCGAGGT CCTGGCAGAG CAGCAGCGCA TTGCAGATGT GTTCCAGACA
CTCAAGCTGA TTCCCAAACC GATCAGAGTT GCAGACGCTG CGTGGCAAGC CCCCACCACG
CAACAGGCGC AGCGCTGA
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| Protein sequence | MSSPIRISLF HNSLRRRLLT GVLVVATGLS YVLFAGPAKA QSQTVNPKLL RIGYQKYGTL
TLLKARGTLE KRLAPQGITV KWTEFPAGPQ LLEGLNVGAI DFGTVGEAPP IFAQAAGAQL
AYIGNEPPAP TAEAIVVPKN STIKSVADLR GKRVALNKGS NVHYLLVRQL EKAGVAYGEI
QPVYLPPADA RAAFERGAVD AWVIWDPFLA AAQKQLDARV LVDGRGADGK NVVSNHQFYL
ASRPYAQARP EVVTAILDEL AQLGQWAEKH PKDAAAVLVK ETSLDPGVLD LAVSRFSYGA
KPVSPEVLAE QQRIADVFQT LKLIPKPIRV ADAAWQAPTT QQAQR
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