Gene Rmet_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1357 
Symbol 
ID4038160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1466344 
End bp1467525 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID637976741 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_583509 
Protein GI94310299 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TCGTCATCGT TTCCGCAGCC CGTACCGCAG TTGGCAAGTT CGGCGGTTCG 
CTCGCGAAGA TTCCCGCGCC GGAGTTGGGC GCCATCGTGA TCAAGGCCGC GCTGGAGCGT
GCCGGCGTGA AGCCGGACCA GGTGAGCGAA GTGATCATGG GCCAGGTGCT GACGGCCGCC
TCGGGTCAGA ACCCGGCACG CCAGGCTTCG CGCAAGGCGG GCCTGCCCGA CATGGTGCCG
GCCATGACCA TCAACAAGGT GTGCGGTTCG GGCCTGAAAG CCGTGATGCT GGCCGCCAAC
GCGATTGTGG CTGGCGAGGC CGAGATCGTC GTGGCCGGCG GCATGGAGAA CATGAGCGCC
GCGCCGCACG TGCTGCCGGG TTCGCGCGAT GGCTTCCGCA TGGGCGACAC CAAGCTGGTC
GATTCGATGA TCGTTGACGG CCTGTGGGAT GTGTACAACC AGTACCACAT GGGTATCACG
GCCGAGAACG TGGCCAAGGA ATACGGCATC ACCCGCCAGG CCCAGGACGA GTTCGCCGTG
GGCTCCCAGA ACAAGGCCGA AGCCGCCCAG AAGGCCGGCA AGTTCGACGA GGAAATCGTT
CCGGTCCTGA TTCCGCAACG CAAGGGCGAT CCGGTTGCGT TCAAGACCGA CGAGTACGTG
CGTCAGGGCG CCACGCTGGA AAGCATGGCT AGCCTGAAAC CGGCCTTCGA CAAGACCGGC
ACGGTGACGG CCGCCAACGC ATCGGGCCTG AATGATGGCG CCGCCGCTGT GGTCGTGATG
TCGGCGGCCA AGGCGCGCGA ACTGGGCCTG ACCCCGCTGG CGACCATCAA GGCGTACGCC
AACGCCGGCG TGGACCCGGC CGTGATGGGC ATGGGCCCGG TGCCTGCCAG CAAGCGCTGC
CTGTCGCGTG CCGGCTGGGA GGTCAAGGAC CTGGACCTGA TGGAAATCAA CGAGGCCTTT
GCCGCTCAGG CACTGGCCGT GCATCAGCAA ATGGGCTGGG ATCAGTCGAA GATCAACGTG
AACGGCGGCG CGATCGCCAT CGGCCATCCG ATCGGCGCGT CAGGCTGCCG CATCCTGGTC
ACGCTGCTGC ACGAAATGAA GCGCCGCGAT GCCAAGAAGG GCCTGGCCTC GCTGTGCATC
GGTGGTGGTA TGGGCGTGGC GCTCGCAGTC GAGCGGAATT AA
 
Protein sequence
MTDIVIVSAA RTAVGKFGGS LAKIPAPELG AIVIKAALER AGVKPDQVSE VIMGQVLTAA 
SGQNPARQAS RKAGLPDMVP AMTINKVCGS GLKAVMLAAN AIVAGEAEIV VAGGMENMSA
APHVLPGSRD GFRMGDTKLV DSMIVDGLWD VYNQYHMGIT AENVAKEYGI TRQAQDEFAV
GSQNKAEAAQ KAGKFDEEIV PVLIPQRKGD PVAFKTDEYV RQGATLESMA SLKPAFDKTG
TVTAANASGL NDGAAAVVVM SAAKARELGL TPLATIKAYA NAGVDPAVMG MGPVPASKRC
LSRAGWEVKD LDLMEINEAF AAQALAVHQQ MGWDQSKINV NGGAIAIGHP IGASGCRILV
TLLHEMKRRD AKKGLASLCI GGGMGVALAV ERN