| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1232 |
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| Symbol | |
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| ID | 4038035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1353160 |
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| End bp | 1355523 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976619 |
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| Product | RNA binding S1 |
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| Protein accession | YP_583387 |
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| Protein GI | 94310177 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.821312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0934617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATC TGCCTGCTTC CGTTCTGCAA AAGATTGTGT CGCTGATCGC GGCCGAACTG
TCCGTGCAAC CCCGCCAGGT AGCGGCTGCC GTCAACCTTC TGGACGAAGG CGCCACGGTG
CCATTCATCG CCCGCTATCG CAAGGAAGTC ACGGGCAACC TGGACGACAC GCAGCTTCGC
ACGCTTGAGG AGCGCCTGCT TTACCTGCGC GACATGGAAG ATCGTCGCGC CACGATCCTG
GCGTCGATCG AGGAACAGGG CAAGCTCACC GACGAACTGC GCGCGGCCAT TGAAGCGGCC
GAGACCAAGC AGACGCTGGA AGACCTGTAC CTGCCCTACA AGCCGCGCCG TCGCACGCGC
GCCCAGATCG CCCGTGAATG CGGCCTGGAA CCACTTGCGC AGGCACTGCT GGCCGACCCG
ACGCTCGATC CCCAAGCCGA GGCCGCCAAG TACGTCAACG GCAACCCCAC CGCCGACGGC
GGCGTGCCCG ACGTCAAGGC CGCGCTGGAC GGCGCGCGCG ACATCCTGTC GGAGCAGTTC
GGCGAAACGG CGGAACTGCT CGGCAAGCTG CGCGAGCATC TCTGGAGCAA CGGCGTGGTG
ACGTCCTCCG TCGTGGAGGG CAAGGAAACC GCCGAGGAAG AGAAATTCCG CGACTACTAC
CAGTACAGCG AGACGATCCG CACCGTGCCG TCGCACCGCG CGCTGGCGCT GTTCCGCGGC
CGCAACGCGG GCGTGCTGAT GGTCAAGCTT GGCCTTGGCG AGGAACAGGA CGCGATGGTG
CCGCATCCGT GCGAGGGCAT GATCGCGCGC CACGTCGGCA TCCAGAACCA GAATCGCCCC
GCCGACAAGT GGCTGGCCGA CGTCTGCCGC TGGAGCTGGC GCGTCAAGGT GCAGCCGCAT
CTGGAAACCG AACTGCTCAC GCAACTGCGC GAGACCGCCG AGGGCGAGGC CATCAAGGTG
TTCGGCCGCA ACCTGCACGA GCTGCTGCTG GCCGCGCCGG CCGGCCCGAA ATCGGTGATG
GGTGTCGACC CGGGCATCCG CACGGGCTGC AAGATCGCCG TGGTGGACAC CACGGGCAAG
CTGCTGGAAA CGGCAACGAT CTACCCGCAC GAGCCGCGCC GCGACTGGAA CGGTTCGCTG
GCCACGCTGG CACGTCTGGC CAAGCAACAC AACGTCGCGC TGTGCTCGAT CGGCAACGGC
ACGGCCAGCC GCGAAACGGA CAAGCTGGTG CAGGACCTGA TGAAGGGCGC GCCCGAGCTG
AAGCTCACCA AGATCGTGGT CAGCGAGGCT GGCGCATCGG TCTACTCGGC CTCGGAACTG
GCGGCCAAGG AGTTTCCGGA ACTCGACGTG TCGCTGCGCG GCGCGGTGTC GATCGCCCGC
CGGCTGCAGG ACCCGCTCGC CGAGCTGGTC AAGATCGACC CGAAATCGAT CGGCGTGGGC
CAGTATCAGC ATGATGTGAA CCAGCGCGAA CTCGCGCGTG CGCTGGACGC CGTGGTGGAA
GACTGCGTAA ATGCGGTGGG TGTGGACGTC AACACGGCCT CCGCCCCGCT GCTGGCACGT
GTCTCGGGCC TGAACTCGGT ACTGGCGCGC AATATCGTCG AATACCGCGA CGCCAATGGC
GCGTTCTCGA ATCGCGATGC GCTGAAGAAG GTGCCGCGCC TGGGCGACAA GACGTTCGAA
CAGGCCGCCG GCTTCCTGCG CGTCAACGAC GGGGACAACC CGCTCGACCG CTCGTCGGTG
CACCCGGAAG CCTATCCGGT GGTGCAGCGC ATCCTGGATC ACATCAAGAA GGGGCTGCCC
GATGTGATGG GCAACCGCGA CGCCCTGCGC GGCCTGTCGG CCCAGCAGTT TGCCGATGAC
ACGTTCGGCC TGCCGACCGT GCGCGACATC CTGTCCGAAC TCGAAAAGCC GGGCCGCGAC
CCGCGCCCCG AGTTCAAGAC CGCGACGTTC CAGGATGGCG TGGAGGACGT CAAGGATCTG
CAGCCCGGCA TGGTGCTTGA AGGCGTGGTG ACGAATGTGG CGGCCTTCGG CGCGTTCGTC
GACATCGGCG TGCATCAGGA CGGCCTGGTC CATATCTCGG CACTTTCGAC GAAGTTCGTC
AAGGATGCAC ACGAGGTTGT CAAGGCCGGC CAGATCGTCA AGGTCAAGGT GATGGAAGTG
GACGTCAAGC GCAATCGCAT CGGCTTGACG ATGCGCCTCG ATGACGAGCC GGGCCAGGCT
ACGGCACGTG CAGGCGGCGC CGATCGTTCG AATGATCGCG GTGGCCAGCG TAACGGCAGT
GGCAAGGGTT CCAACGGCGG CAACCGTCGT GAAGCGGTGC AGCAAGGCGC GATGGCAGCG
GCATTCGCCA AGCTGAAGCG CTAA
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| Protein sequence | MSNLPASVLQ KIVSLIAAEL SVQPRQVAAA VNLLDEGATV PFIARYRKEV TGNLDDTQLR
TLEERLLYLR DMEDRRATIL ASIEEQGKLT DELRAAIEAA ETKQTLEDLY LPYKPRRRTR
AQIARECGLE PLAQALLADP TLDPQAEAAK YVNGNPTADG GVPDVKAALD GARDILSEQF
GETAELLGKL REHLWSNGVV TSSVVEGKET AEEEKFRDYY QYSETIRTVP SHRALALFRG
RNAGVLMVKL GLGEEQDAMV PHPCEGMIAR HVGIQNQNRP ADKWLADVCR WSWRVKVQPH
LETELLTQLR ETAEGEAIKV FGRNLHELLL AAPAGPKSVM GVDPGIRTGC KIAVVDTTGK
LLETATIYPH EPRRDWNGSL ATLARLAKQH NVALCSIGNG TASRETDKLV QDLMKGAPEL
KLTKIVVSEA GASVYSASEL AAKEFPELDV SLRGAVSIAR RLQDPLAELV KIDPKSIGVG
QYQHDVNQRE LARALDAVVE DCVNAVGVDV NTASAPLLAR VSGLNSVLAR NIVEYRDANG
AFSNRDALKK VPRLGDKTFE QAAGFLRVND GDNPLDRSSV HPEAYPVVQR ILDHIKKGLP
DVMGNRDALR GLSAQQFADD TFGLPTVRDI LSELEKPGRD PRPEFKTATF QDGVEDVKDL
QPGMVLEGVV TNVAAFGAFV DIGVHQDGLV HISALSTKFV KDAHEVVKAG QIVKVKVMEV
DVKRNRIGLT MRLDDEPGQA TARAGGADRS NDRGGQRNGS GKGSNGGNRR EAVQQGAMAA
AFAKLKR
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