Gene Rmet_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1220 
Symbol 
ID4038023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1337867 
End bp1339114 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content64% 
IMG OID637976607 
Productbenzoyl-CoA oxygenase subunit A 
Protein accessionYP_583375 
Protein GI94310165 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID[TIGR03224] benzoyl-CoA oxygenase/reductase, BoxA protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.655891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0139439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCG CCGACATCAT CAAGCAACAT CTGATCGACC CGGAAATCTG CATTCGCTGC 
AACACCTGCG AAGACACGTG CCCGATAGAT GCCATCACTC ACGACGACCG CAACTACGTG
GTCAAGGCTG ACGTCTGCAA TGCGTGCAAT GCATGCCTGT CGCCCTGCCC CACCGGCGCC
ATCGACAACT GGCGCACGAT GCTCAAGGGC CAGGCCTACA CCATCGAAGC CCAGTTGACC
TGGGACGAAC TGCCGGAAGA GGTGCCGTTG CCGGAAGCGG AGATCGAGGC AGCGGCTGCG
GCCGGGCAGG TCATCGAGGA AGCGTCGCGC GGCAGCAAAT CCGTGGCCGT TCAGGAGGTG
GAGGCCAGTC GGCATACGTC ATCCAGGGCG CCGTGGTCGG CCGCGCATCC GTACGTCAAC
CTGCATGGCG TGCGCGAGCC GGTGACCGCC ACAGTGGCCG GCAACCACCG GCTGACCGCC
GAGGATGCAT CGAGCGACAT CCATCACATC GTGCTCGACT TCGGCAATCA CTTCTTTCCG
GTGCTGGAAG GTCAGGCAAT CGGGATCGTC CCGCCCGGCA CCGATGCATC CGGAAAGCCG
CACTACATCC GCATGTATTC GGTGGCCAGC CCGCGCGACG GCGAGCGGCC GGGTTATAAC
AACCTCGCGC TGACCGTAAA GCGCGTGGAC ACCGATCACG ATGGCAACCC AGTGCGCGGC
GTGGCGTCGA ACTTCCTGTG CGACCTGGCC AAGGGTGACC CTGTGCAGGT GGTCGGGCCG
TTCGGCAGCA CATTCCTGAT GCCGAACCAC CGCGAAGCGA GCGTGATGAT GATCTGCACC
GGTACCGGAT CCGCGCCGAT GCGGGCGATG ACCGAGCGTA TGCGCCGCAA CATGGACCAC
TTCAGCGGTC GCCGGCTGCT GTTCTTCGGC GCCCGCAATC GGCGGGAACT GCCCTACTTT
GGCCCGCTGC TGAAGCTACC CAAGGACTTC CTGGACATCC ACTTCGCGTT CTCGCGCGAT
CCGGAGGTAC CGCGCCGGTA TGTGCAGGAC GCCATTCGCG AGGCCTCGGC CCAGGTGGCC
GCGTTGCTGG CGGACCCGCA TGGTCATATC TACATCTGCG GACTCAAGGG GATGGAGGAA
GGCGTGCTGG ATGCATTCGC CGAGGTCTGC GCCACGTCGG GTCAGTCGTG GCAGGACATC
GAACCGCGCC TGCGTGCCGA AGGTCGCCTG CATATCGAAA CGTATTAG
 
Protein sequence
MGAADIIKQH LIDPEICIRC NTCEDTCPID AITHDDRNYV VKADVCNACN ACLSPCPTGA 
IDNWRTMLKG QAYTIEAQLT WDELPEEVPL PEAEIEAAAA AGQVIEEASR GSKSVAVQEV
EASRHTSSRA PWSAAHPYVN LHGVREPVTA TVAGNHRLTA EDASSDIHHI VLDFGNHFFP
VLEGQAIGIV PPGTDASGKP HYIRMYSVAS PRDGERPGYN NLALTVKRVD TDHDGNPVRG
VASNFLCDLA KGDPVQVVGP FGSTFLMPNH REASVMMICT GTGSAPMRAM TERMRRNMDH
FSGRRLLFFG ARNRRELPYF GPLLKLPKDF LDIHFAFSRD PEVPRRYVQD AIREASAQVA
ALLADPHGHI YICGLKGMEE GVLDAFAEVC ATSGQSWQDI EPRLRAEGRL HIETY