Gene Rmet_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1216 
Symbolaat 
ID4038018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1334905 
End bp1335654 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID637976602 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_583371 
Protein GI94310161 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0966348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0935273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCT GGCTCGACCC GCAGGACCCG TTTCCACCGG TCGAGCGCGC GCTCGGACCA 
GCAAGTGACG CGCCGGGACT CCTTGCGGCC AGCCGCGATC TTTCACCGCA GCGCCTGCTT
CTAGCCTATC GACAAGGCAT CTTTCCCTGG TACTCGGAAG GCCAGCCCGT TCTATGGTGG
AGCACCGACC CGCGTATGGT GCTGGCCCCG CATCGGCTGA AGATTTCGGT GTCCCTGCGG
AAGACCCTGC GTCGCATCCT GCGGGACCCC GACTGGGAAA TCCGCGTCGA TGACGATTTC
GTCGCCGTGA TGCAGGCTTG CGCAATGACC CCACGCGATG GCCAGCTCGG CACTTGGATC
ACGGACGACA TCGTCGCAGC GTACGGCAGC CTGCATCGCC TCGGACTCGC GCACTCTGTC
GAGACCTGGT ATCGCGGCGA ACGCGTTGGC GGCCTCTACG GCGTGGCCCT GGGGCGCATG
TTCTACGGCG AGTCGATGTT CGCCCACCGC ACGGATGCGT CGAAGATCGC CCTTGCGGCG
CTATGCGGAT TCCTCGAACG CCACGGCGTA ACCATGATCG ACTGCCAGCA GGAGACCGAT
CACCTCGCCT CGCTCGGCGC CGAACCAATC CCTCGCGAGC AGTTCATTGC ACACGTTCGC
CAGACGGCTG CCGAAGCCAA TATCTCTCCC TGGCGTTTTG ACAAATCTGA ACTGACGCGC
TGGACATCAC AGGCAAGCAC CGAACTCTGA
 
Protein sequence
MITWLDPQDP FPPVERALGP ASDAPGLLAA SRDLSPQRLL LAYRQGIFPW YSEGQPVLWW 
STDPRMVLAP HRLKISVSLR KTLRRILRDP DWEIRVDDDF VAVMQACAMT PRDGQLGTWI
TDDIVAAYGS LHRLGLAHSV ETWYRGERVG GLYGVALGRM FYGESMFAHR TDASKIALAA
LCGFLERHGV TMIDCQQETD HLASLGAEPI PREQFIAHVR QTAAEANISP WRFDKSELTR
WTSQASTEL