Gene Rmet_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1210 
Symbol 
ID4038012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1328884 
End bp1329780 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID637976596 
Productinner-membrane translocator 
Protein accessionYP_583365 
Protein GI94310155 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0487778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCT TTTCCCTTCT GGGCGCCCTC GAGATCGGCC TGATCTTCAG TCTCGTGGCG 
CTCGGGGTGC TGATTTCCTT CCGCATCCTC AATTTCCCCG ACCTGACCGT CGACGGCAGC
TTCCCGTTGG GCGGTGCCGT GGCTGCCACG CTGATCTCGG CCGGGCACGA CCCGTTCACC
GCCACAGTGG CGGCCATCAT CGCCGGATCG CTGGCCGGTT TCATCACTGG CTGGCTCAAT
GTGCGACTCA AGATCATGGA CCTGCTGGCC AGTATCCTGA TGATGATCGC GCTGTACTCG
GTCAACCTGC GCGTCATGGG CCGCCCGAAC GTGCCTCTGA TCACCGAACC GACCATCTTC
ACGATCCTGC AGCCGGAATG GATGCCCGAC TACGTGCTGC GCCCTGTGGT GCTGTTCGTG
GTGGTCGTGA TCGCCAAGAT TGGCCTGGAT TGGTTCTTCT CGTCGCAGCT TGGCTTGGCG
ATGCGCGCCA CCGGCGCCAA CCCGCGCATG GCCCGCGCCC AGGGCGTGCC CACTGGCCGC
GCGACGCTGG CCGGCATGGC GCTCTCGAAT GCGCTCGTCG CACTGGCAGG CGCACTGTTC
GCGCAGACAC AAGGCGGCTC CGACATCTCG ATGGGTATCG GCACGATCGT GATCGGCCTG
GCCGCTGTGA TCATCGGCGA AACGATCATT CCGGCACGAC GTCTGGTGTA CGTCACGCTG
GCTGTGGTGG TTGGCGCAAT CCTCTATCGT TTCTTCATCG CGCTGGCGCT AAACAGTGAA
TTCATCGGCC TCAAGGCACA GGATCTGAAC CTGGTGACGG CTGCCCTCGT GACGCTGGCA
CTGGTGCTGC CGGCCACGCG CAAGAAGCTG TTCGCCCGCA AGAACGGAGG TGCCTGA
 
Protein sequence
MSLFSLLGAL EIGLIFSLVA LGVLISFRIL NFPDLTVDGS FPLGGAVAAT LISAGHDPFT 
ATVAAIIAGS LAGFITGWLN VRLKIMDLLA SILMMIALYS VNLRVMGRPN VPLITEPTIF
TILQPEWMPD YVLRPVVLFV VVVIAKIGLD WFFSSQLGLA MRATGANPRM ARAQGVPTGR
ATLAGMALSN ALVALAGALF AQTQGGSDIS MGIGTIVIGL AAVIIGETII PARRLVYVTL
AVVVGAILYR FFIALALNSE FIGLKAQDLN LVTAALVTLA LVLPATRKKL FARKNGGA