Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1204 |
Symbol | |
ID | 4038006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1323302 |
End bp | 1324483 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637976590 |
Product | murein-DD-endopeptidase |
Protein accession | YP_583359 |
Protein GI | 94310149 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000748376 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.179328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGGA TCGAATCTCT CATGCCCCGA TTCTTCGGCC TACCCCAATT GACCGCGCTC GCCACTTCGG CGGTCGTGTC CATTGCCCTG CTGGCCGCGC CGGCCTCGTA CGCAGCGACG TCGTCGACTG CGACGAAGTC GTCGTCGAAA AAGCAGGCAA AATCCACTAA AACCACCAAA AAGGTGGCTT CCGCGAAGGC GGAGGCGTCG CCGCGCAAGG TGATCGTCGT GCGCAACGGC AAACGTACCG TCGTTGCAAG CCGCGCGGCG CCAGTGCGTG CGGCGTTCGT GCCGTCCAAG CCGTCGCTGG GCGAGGCGAT GGGCCTGCGC GATACCGAGG ATGCGCTTGC CCTGCGATCG TCAGTGGCGC TGGTCATGGA TCAGAACACC AATGAGGTGC TGTTCCAGAA GAATCCCACG GCTGTGCTGC CGATCGCATC CATCACCAAG CTGATGACCG CGCTGGTGGT GATGGACGCA CGTCTGCCGA TGGACGAGAT GCTCACGGTG ACCGAGGAAG ACCGCGATAC CGAGAAGCAC AGCAGTTCGC GTCTGCGCTT TGGTACCCAG CTGACCCGCC AGGAGATGCT GCTGCTGGCG TTGATGTCGT CGGAAAACCG TGCTGCTTCG GCGCTGGGTC GTAACTATCC GGGTGGCCTG CCGGCCTTTG TTGGCGCGAT GAACCGCAAG GCGCGCGAGC TTGGCATGAG TGACAGCCAC TTCGTCGATT CGAATGGCCT GTCGAGCAGC AATGTGTCGA GCGCGATGGA TCTGGCCCGC CTGGTCAATG CCGCCTATCG CAATCCGACG ATCCGCGAGT ACTCGACGCA ACCCGAGCAC GAAGTCACCG TGTTTGGCCG TCCGATGCAC TACGTCAGCA CCAACCGCCT GGTGCGTGGC GGCAACTGGG ATATCGGTCT GCAGAAGACC GGTTATATCT CCGAAGCCGG CCAGTGCCTG GTGATGCAGA CACGCGTGAA TGATCGCAAT GTGGTGATGG TGTTCCTCGA CTCGGTTGGC AAGCTGTCGC GCTTTGCCGA TGCCACGCGC GTGCGTAGCT GGCTCGAGCA TCAACCGGCG ACGTCGGCGC AACCGCGCCC TTTCCCGTCG AATCCCAATC TCACTCAGGG CCCTAAATCG CCCACGGCGA TCCTGGTCTC GCAGCAGTCG CACGGAACCT GA
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Protein sequence | MFRIESLMPR FFGLPQLTAL ATSAVVSIAL LAAPASYAAT SSTATKSSSK KQAKSTKTTK KVASAKAEAS PRKVIVVRNG KRTVVASRAA PVRAAFVPSK PSLGEAMGLR DTEDALALRS SVALVMDQNT NEVLFQKNPT AVLPIASITK LMTALVVMDA RLPMDEMLTV TEEDRDTEKH SSSRLRFGTQ LTRQEMLLLA LMSSENRAAS ALGRNYPGGL PAFVGAMNRK ARELGMSDSH FVDSNGLSSS NVSSAMDLAR LVNAAYRNPT IREYSTQPEH EVTVFGRPMH YVSTNRLVRG GNWDIGLQKT GYISEAGQCL VMQTRVNDRN VVMVFLDSVG KLSRFADATR VRSWLEHQPA TSAQPRPFPS NPNLTQGPKS PTAILVSQQS HGT
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