Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1181 |
Symbol | |
ID | 4037981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1290312 |
End bp | 1295183 |
Gene Length | 4872 bp |
Protein Length | 1623 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637976565 |
Product | glutamate dehydrogenase (NAD) |
Protein accession | YP_583336 |
Protein GI | 94310126 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.137841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCGG AAAACGAAGA AAAGGTTGCG CAGTTGCTGG ATGAGTTGGT CGCGTTCGCG CACGAACGGC TGCCGGCTGC GACGTTCGGG ATCGTCGAAC CCCTGCTGCG GCACTACTAC GACCTGGCCG ATGGCGAGGA CCTGCTCGCA CGCAACGTGG CCGATCTCTA CGGCGCCGTC ATGGCGCACT GGCAGACGGC GCAGAAGTTC GTGCCGGGCA CCGCTCGATT GCGCGTCTAC AACCCGAACC TCGAGGAACA CGGCTGGCAC TCGGACCACT CCATTGTCGA GATCGTCAAC GACGACATGC CGTTCCTGGT CGATTCGGTC ACCACGGAGA TCAACCGGCA CGGACTGACG CTGCACTCGG CCATCCACCC GGTCTTTCGC GTCTGCCGCG ACACGCGCGG CGGCATCGAG AGCATCGGCC TTGGCGGGGG CGAGATGGGC GCCACCAACT GCCGGCTCGA ATCGTTCATC CATTTCGAAG TCGACCGCAC AGGCGAGGCC ACGCAACTCG AAGCCTTGCG CAATGCCATC GCGCGCGTCC TCGGCGATGT GCGGGTAGCC GTGGAAGACT GGCCGCGCAT GCAACAGATT GCGCGCGACA CAATCGGCGG CATGGCCCAG GCCCCAGATG CCGCCACGCC GGAGTCGGTG GAAGCACGCG CGTTCCTGGA ATGGATGCTG GACGACCACT TCACGTTCCT CGGGCATCGC GACTACGAGC TGATCTCGCG CGATGGCCAG TTCTGGCTGC GCGGCGTGCC CGGCTCCGGC GCGGGCATTC TGCGCGAGGC CCTGCGCGAC CCTGCGGCGG AAGACCTCAC GTCCCTGCCC GCGGCCGCCC GCAGCGTCAT CGAAGGCGCC ACGCCGATCT TCCTGACCAA GGCCAATTCG CGCGCCACGG TGCATCGACC CGGCTACCTC GACTACGTCG GGGTCAAGCT GCTAGACGCT AACGGCAAGC TGTTCGGCGA ACGCCGTTTC GTGGGCCTGT ACACGTCCAC GGCCTACATG GTCAGCACCA GCGAGATCCC GCTGGTACGC CGCAAGTGCG CCAACATCCT GTCGCGCGCC GGCTTCCTGA CAAAGGGCCA TCTGTACAAG TCCTTGATCA CCATCCTGGA ACAGTACCCA CGCGACGACA TGTTCCAGGC CGACGAAGAC GAGCTGTTCG ACATCACACT CGGCATCCTG CGGCTGCAGG AACACCAGCG CACGCGCCTG TTCGTTCGGC GCGACCGCTT CGACCGCTTC ATCTCCTGCC TGGTGTTCGT ACCGCGCGAC AAGTACAACA CCGACCTGCG CCAGCGCATC CAGAAGTTGC TGATGCAGGC GTTCAACGGC ACGGGCTGCG AATTCACGCC ACTACTGTCC GAATCCCCGC TGGCACGTAT CCAGATCACG GTGCGCGGGC AGCCCGGCAC GATGCCGGAG GCCGATACCC GCGAGCTCGA AGAGCGGATC GTGCAGGCCA CGCGCCGCTG GCAGGACGAC CTGTCCGCCG CGCTGCACGA GACGCGCGGA GAGGAGCACG GCAACAGGTT GCTGCGCCGC TATGGCGACT CGTTCCCGGC AGGCTATCGC GAGGACTATC CCGCGCGTAC CGCCGTGCGC GATATCGAAC TGATGGAGCA CGCGCGCCAG CATCCGAACG GACTGGCCAT GAACCTGTAT CGCCCGATTG AAGCCGCCCC TGGCGCGTTC CGCTTCAAGG TATTCCGCGC CGGCCTGCCG ATCGCGCTGT CGGCAAGCCT GCCCATGCTC GAACACCTGG GCGTGCGCGT CGACGAGGAA CGTCCCTATC TGATCGAACC CGACGCCGGC GACCCGATAT GGATCCACGA CTTCGGCCTG GAGATCGCCG CCGACCATGA GGGCCAGCCA GTCGATATCG AGATCGAGCG CGCCAAGCCG CTGTTCGAAG ACGCTTTCGG ACGCGCCTGG AATGGCGAGA TCGAGAACGA CGACTTCAAC CGGCTGGTGC TGCGGGCGGG CCTTGCCGCG CGGGACGTGA CGATCCTGCG CGCCTACGCC AAGTACCTGC GCCAGGTGGG CTCCACGTTC AGCAATGCCT ATATCGAACA GGCGCTGGCG GCAAACCCGC GTATCGCGGC GATGCTGGTC TCGCTGTTCG TCTCCCGCTT CGACCCGGCC GTTGCCGCCG CCGGCACACC CGACGATGCC CGCTGCCGCA AGCTGCTGGC CGATATCGAA TCCGCGCTCG ACCAGGTGCC GAATCTCGAC GAGGATCGCA TCCTGCGGCT GTTCCTCAAC GTAATCAGCG CAACTGTGCG CACCAATTAC TTCCATCACG ACGCGGACGG TCATCCACGC CCCTACATTT CGTTCAAGTT CAATCCGGCG CTGGTACAGG GGCTGCCCGA GCCGCGACCG ATGTTCGAGA TCTGGGTCTA CTCGCCACGG GTGGAGGGCG TGCACCTGCG CGGCGGACGC GTGGCGCGTG GCGGATTGCG ATGGTCGGAC CGGCGCGAGG ATTTCCGCAC CGAGGTGCTG GGCCTGATGA AGGCGCAGAT GGTCAAGAAC ACGGTCATCG TGCCGGTCGG CTCGAAGGGC GGCTTCGTCG TCAAGCGGCC GCCGCCGCCC ACCGATCGCG ATGCGTTCCT CGCCGAAGGC GTGGCCTGCT ACCAGACCTT CCTGCGCGGC CTGCTCGACC TGACCGACAA CCTCGTCTCC GGCAACCTCG TGCCGCCACC CGAGGTGGTG CGTCATGACG ATTCGGACCC ATACCTCGTG GTGGCAGCCG ACAAGGGCAC GGCTACGTTC TCGGACTATG CGAACGCCAT CTCGGCCGAA TACGGTTTCT GGCTCGACGA CGCCTTCGCC TCCGGTGGAT CGGTTGGCTA CGACCACAAG AAGATGGGCA TCACCGCGCG CGGCGCGTGG GAAAGCGTCA AGCGGCACTT TCGGGAAATG GGCACCGATA TCCAGGCCAC GCCGTTCACG GTGGTCGGCG TTGGCGACAT GTCTGGCGAC GTGTTCGGCA ACGGCATGCT GCTATCTCCC CACATCAAAC TCGTGGCCGC GTTCGACCAT CGCCATATCT TCCTTGACCC GGATCCGGAC TGCGCGAAGA GCCTGGCCGA GCGCGCGCGC ATGTTCGATC TGCCGCGTTC GAGCTGGGCC GATTACGACG CCACGCTGAT TTCCGCAGGT GGCGGCATCT ATCCACGCAC AGCCAAGACG ATCGCGCTCT CGCCGCAGGT ACAGGCCGTG CTCGGCATCA CGGCGGCATC GCTGCCTCCC GCCGAATTGA TCCACGCGAT CCTGATGGCA CCGGTGGATC TGCTCTACAA CGGCGGCATC GGCACCTACG TCAAGGCGAG TACCGAAACC CACCAGCAAG CCGGCGATCG CGCCAACGAC CCGGTACGTG TCAACGGCAA CGAACTGCGC TGCAAGGTGG TGGGCGAAGG CGGGAACCTC GGTTTCACCC AGCTCGGGCG TATCGAGTTT GCCCGCCACG GCGGCCGTAT CAATACGGAT GCCATTGACA ATTCCGCCGG CGTCGACTGC TCCGACCACG AGGTGAATAT CAAGATCCTG CTTGGCATCG TAGTGGCCGA TGGCGAGATG ACCGAGAAGC AACGCAACAA GCTGCTGGCC GAGATGACCG ACGAGGTTGG CCTGCTGGTG CTGCAGGACA ATTACTTCCA GACCCAGGCG CTCTCGGTCG CGGGCCGCGT GGCGCCGGTG CTGGTCGATG CCGAAGCGCG GCTGATCCGC TGGCTGGAAC GCGCGGGCCG TCTCAACCGG CCGCTCGAGT TTCTGCCCAC GGACGAGGAC ATCACCGAAC GCAAGGCGCT GGGCGCCGGG CTGACATCAC CCGAACGCGC GGTGCTGCTG GCCTACAGCA AGATGTGGCT CTACGACGAA CTGCTTGCGT CCGATATCCC CGAGGATGTG CTCGTGGCCG GGCTGCTGGC CGACTACTTC CCGCAGCCGC TACGCCAGCG CTACGCGGAG GCCATGCAGC GCCATCCGCT GCGGCGCGAG ATCCTGGCCA CGCACCTGAC CAACATGCTG GTGAACCGCG TCGGTGCCAC GTTCGTCCAT CACCAGATGG AGGAAACCGA CGCGCGGCCC GCTGACATCG TGCGCGCCTG TCTGCTGGCC CGCGATGTGT TCGGGCTTAC CGGGCTATGG GAACGGATCG ACGGGCTCGA CAATCGCGTC GAAGACGCCG TGCAGGCGCG CATGTTCGGC GATCTGGCGC GGCTGCTCGA ACGCGCCACG CTCTGGTTCA TCCGCTATCT GCGCGCGGGC GGTACCGTGG AGCCGGGCGC AGCCAGGTTC GTCGATGCGG CGCATTGGCT CACGCCACAA TTGCCGACGC TGCTGCCGCC CGAGCCATCG CAGGCCATGG CCGAACGCGC CATGGCCCTG ACCGAAGCCG GCGTCGACGA AGATCTGGCG CTACGTGTGG CGGCCAGCGA TATCGCGGCG GCGGCGCTCG ACATCGCGGA GGTCTCTGGA ACATGTGGCC GCAGCCTTGG CGCCGTGGCA GGGGTCTACT TCGCCCTGGA CACCGAACTC AACTTCGGAT GGCTGCGCGA GCGCGCGTTG TCTCTACCCG CGGAGACGCA CTGGGATCTG CTGGCACGCA CGACTACGCT CGACGACCTG GGTCGGCTCA AGCGGGCGTT GACGACGAGT GTGCTGGGCC AGTCGCGCGA CACGGATGAC CCACAGGCGC TCATCGAGGG CTGGCGCGGC ACCCGTCAGG CGGCGCTGGA TCGCTATGCC CAGATGCTGG CCGACCAACG CGCCTCGGGC GTTTCAGGCG TGGCGGCCTT GTCGATGCTG TCGGTCGCGG TCAGGGAGAT TGGCTTGCTC GAACGCGCCT GA
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Protein sequence | MPPENEEKVA QLLDELVAFA HERLPAATFG IVEPLLRHYY DLADGEDLLA RNVADLYGAV MAHWQTAQKF VPGTARLRVY NPNLEEHGWH SDHSIVEIVN DDMPFLVDSV TTEINRHGLT LHSAIHPVFR VCRDTRGGIE SIGLGGGEMG ATNCRLESFI HFEVDRTGEA TQLEALRNAI ARVLGDVRVA VEDWPRMQQI ARDTIGGMAQ APDAATPESV EARAFLEWML DDHFTFLGHR DYELISRDGQ FWLRGVPGSG AGILREALRD PAAEDLTSLP AAARSVIEGA TPIFLTKANS RATVHRPGYL DYVGVKLLDA NGKLFGERRF VGLYTSTAYM VSTSEIPLVR RKCANILSRA GFLTKGHLYK SLITILEQYP RDDMFQADED ELFDITLGIL RLQEHQRTRL FVRRDRFDRF ISCLVFVPRD KYNTDLRQRI QKLLMQAFNG TGCEFTPLLS ESPLARIQIT VRGQPGTMPE ADTRELEERI VQATRRWQDD LSAALHETRG EEHGNRLLRR YGDSFPAGYR EDYPARTAVR DIELMEHARQ HPNGLAMNLY RPIEAAPGAF RFKVFRAGLP IALSASLPML EHLGVRVDEE RPYLIEPDAG DPIWIHDFGL EIAADHEGQP VDIEIERAKP LFEDAFGRAW NGEIENDDFN RLVLRAGLAA RDVTILRAYA KYLRQVGSTF SNAYIEQALA ANPRIAAMLV SLFVSRFDPA VAAAGTPDDA RCRKLLADIE SALDQVPNLD EDRILRLFLN VISATVRTNY FHHDADGHPR PYISFKFNPA LVQGLPEPRP MFEIWVYSPR VEGVHLRGGR VARGGLRWSD RREDFRTEVL GLMKAQMVKN TVIVPVGSKG GFVVKRPPPP TDRDAFLAEG VACYQTFLRG LLDLTDNLVS GNLVPPPEVV RHDDSDPYLV VAADKGTATF SDYANAISAE YGFWLDDAFA SGGSVGYDHK KMGITARGAW ESVKRHFREM GTDIQATPFT VVGVGDMSGD VFGNGMLLSP HIKLVAAFDH RHIFLDPDPD CAKSLAERAR MFDLPRSSWA DYDATLISAG GGIYPRTAKT IALSPQVQAV LGITAASLPP AELIHAILMA PVDLLYNGGI GTYVKASTET HQQAGDRAND PVRVNGNELR CKVVGEGGNL GFTQLGRIEF ARHGGRINTD AIDNSAGVDC SDHEVNIKIL LGIVVADGEM TEKQRNKLLA EMTDEVGLLV LQDNYFQTQA LSVAGRVAPV LVDAEARLIR WLERAGRLNR PLEFLPTDED ITERKALGAG LTSPERAVLL AYSKMWLYDE LLASDIPEDV LVAGLLADYF PQPLRQRYAE AMQRHPLRRE ILATHLTNML VNRVGATFVH HQMEETDARP ADIVRACLLA RDVFGLTGLW ERIDGLDNRV EDAVQARMFG DLARLLERAT LWFIRYLRAG GTVEPGAARF VDAAHWLTPQ LPTLLPPEPS QAMAERAMAL TEAGVDEDLA LRVAASDIAA AALDIAEVSG TCGRSLGAVA GVYFALDTEL NFGWLRERAL SLPAETHWDL LARTTTLDDL GRLKRALTTS VLGQSRDTDD PQALIEGWRG TRQAALDRYA QMLADQRASG VSGVAALSML SVAVREIGLL ERA
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