Gene Rmet_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1161 
Symbol 
ID4037960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1272089 
End bp1272553 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content59% 
IMG OID637976544 
Producttranslation initiation factor 3 
Protein accessionYP_583316 
Protein GI94310106 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.41261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.930143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAGGGG TTGATAACGA GCAGCTCGGC ATCGTCAAAT TCATGGACGC ACTGCGCCTG 
GCCGAGGACA AGGACTTGGA TCTCGTGGAG ATCGCGCCCA ACGCGACTCC GCCCGTGGCC
CGCATCATGG ACTACGGCAA GTTCAAGTAC GAGGAAGCCA AGCGCGCCCA CGAGGCCAAG
CTCAAGCAGA AAATCATCCA GGTCAAGGAA GTGAAATTCC GTCCTGGCAC GGATGATGGC
GACTACAACG TCAAGCTGCG CAACTTGCGA CGCTTCCTGG AAGAGGGTGA CAAGACCAAG
ATCACGTTGC GCTTCCGTGG CCGTGAAATG GCCCACCAGG AAATCGGCGC GCGCGTGCTC
GAGCGTCTGA AGGCTGACCT GGAGGAACTG GGTCAGGTCG AGCAGATGCC GAAGATGGAA
GGTCGCCAGA TGGTGATGGT GCTGGCCCCC AAGAAGAAGA AGTGA
 
Protein sequence
MVGVDNEQLG IVKFMDALRL AEDKDLDLVE IAPNATPPVA RIMDYGKFKY EEAKRAHEAK 
LKQKIIQVKE VKFRPGTDDG DYNVKLRNLR RFLEEGDKTK ITLRFRGREM AHQEIGARVL
ERLKADLEEL GQVEQMPKME GRQMVMVLAP KKKK