Gene Rmet_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1157 
Symbol 
ID4037955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1266068 
End bp1266949 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID637976539 
Productalpha/beta hydrolase fold 
Protein accessionYP_583312 
Protein GI94310102 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0750914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA GTCCGCGCCT CGGCTTCGTA CAGTGCATCA GTGCCGCCGG CCTGCATCGC 
ATGGCCTATC ACGAGTGGGG AGATCCCGCG AATCAGCGAG TGCTGGTGTG CGTGCACGGC
CTGACCCGTA CCGGACGTGA TTTCGATGCG CTGGCACGTT CGTTGAGCGA CGAGTACCGC
GTGGTGTGCC CGGACGTGGC GGGCCGTGGC CGCTCCGACT GGCTGGCCGA CCCGCGGGGC
TACGTGTTGC CGCAGTACGT GTCCGATATG GTCACGCTGA TCGCGCGACT GAACGTCGAA
CAGGTGGACT GGTTCGGCAC GTCGATGGGC GGGCTGATCG GCATCGGGCT GGCCGGGCTG
GCCAAGTCGC CGGTGCGCAA GCTGCTGCTC AACGATGTGG GTCCGCGCAT CACCGCGCAA
TCGATGGAAC GGATTGGTGC GTATCTGGGT TTGCCGGTGC GCTTCAAGAC GTTCGAGGAA
GGGTTGGCCT ATCTGCAAAC GATCAGCGCT TCATTCGGCC GTCATACTCC CGAGCAGTGG
CGCGAGTTGA ATGGCGCGAT CCTGAAACCG GTGCAGGGCG CCGAGGGGCT CGAATGGGGA
TTGCATTACG ACCCGGCGCT GGCCGTGCCG TTCAAGGACG CGACGCCGGA GGCGATGCAG
GCTGGTGAGG CCGCGCTGTG GGCGATGTTC GAGGCCATTC AAGGGCCGAC ACTGGTGGTG
CGCGGCGCGC AGTCCGATCT GCTGATGCGC GAGATCCTGG CCGAAATGGT GGCGCGCGGA
AAGCAGGTGT CGAGCGTGGA GATTCCCGAT GTGGGTCATG CTCCGACCTT CGTCGATGCG
GCGCAGATTG CCATCGCCCG TCAATTTTTC CTGGGGTCTT GA
 
Protein sequence
MSSSPRLGFV QCISAAGLHR MAYHEWGDPA NQRVLVCVHG LTRTGRDFDA LARSLSDEYR 
VVCPDVAGRG RSDWLADPRG YVLPQYVSDM VTLIARLNVE QVDWFGTSMG GLIGIGLAGL
AKSPVRKLLL NDVGPRITAQ SMERIGAYLG LPVRFKTFEE GLAYLQTISA SFGRHTPEQW
RELNGAILKP VQGAEGLEWG LHYDPALAVP FKDATPEAMQ AGEAALWAMF EAIQGPTLVV
RGAQSDLLMR EILAEMVARG KQVSSVEIPD VGHAPTFVDA AQIAIARQFF LGS