Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1138 |
Symbol | |
ID | 4037936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1245129 |
End bp | 1246238 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637976520 |
Product | chorismate synthase |
Protein accession | YP_583293 |
Protein GI | 94310083 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.26701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGGCA ATACCCTCGG CCTGCTTTTC ACAGTTACCA CGTTCGGCGA ATCGCACGGG CCCGCCATCG GCGCGGTAGT GGATGGCTGC CCGCCGGGGA TGTCGCTGAC CGAAGCCGAC ATCCAGATCG ACCTGGACCG CCGCAAGCCC GGCACGTCGC GCCACGTGAC ACAGCGCCAG GAAGCGGATC AGGTGGAGAT CCTGTCCGGC GTATTCGAAG GTAAGACCAC GGGCACGCCG ATCTGCCTGC TGATCCGCAA CACCGACCAG CGCAGCAAGG ACTACGGCAA CATCGTCGAG ACGTTCCGCC CGGGCCATGC CGACTACACC TACTGGCACA AGTACGGTAT CCGTGACTAT CGCGGTGGTG GCCGCTCGTC GGCGCGCCTG ACCGCACCCG TGGTGGCCGC CGCGGCAATC GCGAAGAAAT GGCTGAATGA GCAGTACGGC ACCGAGATTC GTGGCTACAT GTCGCAGCTC GGTGAGGTCG AAGTGCCGTT CACCGACTGG AAACACGTGC CGGAGAACCC GTTCTTCGCG GCGAATGCCG ATATCGTTCC CGAGTTGGAA ACCTACATGG ATGCGCTGCG CCGCGACGGC GACTCCGTCG GCGCGCGTAT CGAAGTGGTG GCCAGCCATG TGCCGGTGGG TCTGGGCGAG CCGCTGTTCG ACAAGCTCGA CGCCGATATC GCGCACGCAA TGATGGGCAT CAACGCGGTC AAGGGCGTCG AGATCGGCGC TGGCTTCGAC AGCGTGTCCC AGCGCGGCAC CGTGCATGGC GACGAACTGA CGCCGGAGGG GTTCCGCACG AATAACTCGG GTGGCGTGCT CGGCGGGATT TCCACCGGGC AGGACATCAA GGTATCGCTG GCAATCAAGC CGACGTCGAG CATCCGTACC GCGCGCGAAT CGATCGACAA GGCTGGCAGC CCGGCCAGCG TGGAAACGTT CGGTCGCCAC GACCCGTGCG TCGGCATCCG CGCCACGCCG ATCGCCGAAG CCATGCTTGC GCTGGTGCTG ATGGACCACG CATTGCGGCA TCGCGCCCAA TGCGGTGACG TCCGCGTCGA CACCCCGCGC ATCCCGGCGC AAGCACCGGG CAAATCCTGA
|
Protein sequence | MSGNTLGLLF TVTTFGESHG PAIGAVVDGC PPGMSLTEAD IQIDLDRRKP GTSRHVTQRQ EADQVEILSG VFEGKTTGTP ICLLIRNTDQ RSKDYGNIVE TFRPGHADYT YWHKYGIRDY RGGGRSSARL TAPVVAAAAI AKKWLNEQYG TEIRGYMSQL GEVEVPFTDW KHVPENPFFA ANADIVPELE TYMDALRRDG DSVGARIEVV ASHVPVGLGE PLFDKLDADI AHAMMGINAV KGVEIGAGFD SVSQRGTVHG DELTPEGFRT NNSGGVLGGI STGQDIKVSL AIKPTSSIRT ARESIDKAGS PASVETFGRH DPCVGIRATP IAEAMLALVL MDHALRHRAQ CGDVRVDTPR IPAQAPGKS
|
| |