Gene Rmet_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1092 
Symbol 
ID4037890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1187734 
End bp1189239 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content59% 
IMG OID637976474 
Productanion transporter 
Protein accessionYP_583247 
Protein GI94310037 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00162595 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGCCA AGATCGTCGC GACATATCGC TACTTCATGT CCGTGGTGCC TTTTCGGCTG 
ACGCCGGCCA TCATCACCAC GGTTGTGCTT GTCACGCTGC TGCTCACACC GACGCCGGCT
GGTTTGAAGG ACAACGCTTG GGATCTGGTC GCCATCTTTC TGACCACGAT CGTCGCCATC
ATTCTCAAGG TGATGCCGAT CGGTGTGATG GCGATGATGG CGATCGTGAT CGTGTCACTG
GCGCAAGTGA CCTCGAACTC GTCCAAGGGC GCCATTGCCG ATGCGCTGAG CAGTTTTGAT
AGTCCGCTGA TCTGGCTGAT CGTTGTGGCC ATCCTGATTT CGCGCGGCCT GAAGAAGACG
GGGTTGGGCA GTCGCATCGG CCTGATGTTC ATCGCGCTTT TGGGCAAGCG GACGGTCGGC
ATTGGCTACG GGCTGGCGAT CTGCGAGCTG GTACTGGCGC CATTCACGCC GAGCAACACC
GCACGCGGCG GCGGCATTGT GCACCCGATC ATGCGGTCGA TTGCAGGCGC CTTCGATTCT
GATCCGGCTA ACGGGACGCA GGGAAAGGTT GGTACCTATC TGGCACTGGT CAACTACCAC
GCCAACCCGA TCACTTCGGC CATGTTCGTG ACCGCCACCG CGCCGAACCC CCTGGTCGTC
GACTACGTGG CCAAGGCCAG TGGCCAGTCG CTTCACCTGA GCTGGACCAC CTGGGCGCTG
TGCATGCTGC TGCCCGGCCT CGTCTGCCTG CTTCTGATGC CGCTTGTTAT TCGCGTGCTC
TGTCCGCCCG AACTGAAGGC GACCCCCAAT GCGATCGAAT ACGCCAAGGG TGAGCTTGCT
CGCATGGGCC CCCTGGGTGG CAAAGAGCGC GTCATGATTG GTGTCTTCGC CATGATGCTG
GTTCTGTGGG CCAACGTGCC GGCAATGATC TGGGGGCCGA CGTTCACGCT CGACCCGACG
GTGGTCGCCT TTCTCGGCCT GTTCGCGTTG ATCATTACCG GCACGATCGA CTGGGACGAT
GTGTTATCGG AGAAGAGCGC CTGGGACACC CTGATCTGGT TCGGCGCTCT GGTAATGCTC
GCGGAACAGC TCAACAAGCT TGGCGTAATC GCATGGTTCT CGGCCGATAT GCGCGATGCC
ATTGCCGCCA GTGGAATGGG TTGGCTCTCG ATTGCCGCCA TATTGGTGCT GGCGTTCGTG
TTTTCCCATT ACCTCTTCGC AAGTACCACT GCCCATATCA GCGCGATGAT GCTGGCCTTT
CTGACAGTGG GCGCGCAGTT GATTCCGCAG CCTTATATCG CACCTTTCAT GCTGATGATG
ACCGCCGGCT CGGCGATCAT GATGACGCTG ACCCACTATG CCACCGGCAC ATCGCCGATC
ATATTTGGCA GCGGGTATGT GACGATGGGG CAATGGTGGC GGGTCGGCGC GGTGATGTGT
GTCTTTGAAC TTGTCATCTT CGCCGTAGTA GGAGGTATCT GGTGGAAGAT TCTGGGGTTC
TGGTAG
 
Protein sequence
MFAKIVATYR YFMSVVPFRL TPAIITTVVL VTLLLTPTPA GLKDNAWDLV AIFLTTIVAI 
ILKVMPIGVM AMMAIVIVSL AQVTSNSSKG AIADALSSFD SPLIWLIVVA ILISRGLKKT
GLGSRIGLMF IALLGKRTVG IGYGLAICEL VLAPFTPSNT ARGGGIVHPI MRSIAGAFDS
DPANGTQGKV GTYLALVNYH ANPITSAMFV TATAPNPLVV DYVAKASGQS LHLSWTTWAL
CMLLPGLVCL LLMPLVIRVL CPPELKATPN AIEYAKGELA RMGPLGGKER VMIGVFAMML
VLWANVPAMI WGPTFTLDPT VVAFLGLFAL IITGTIDWDD VLSEKSAWDT LIWFGALVML
AEQLNKLGVI AWFSADMRDA IAASGMGWLS IAAILVLAFV FSHYLFASTT AHISAMMLAF
LTVGAQLIPQ PYIAPFMLMM TAGSAIMMTL THYATGTSPI IFGSGYVTMG QWWRVGAVMC
VFELVIFAVV GGIWWKILGF W