| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1088 |
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| Symbol | |
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| ID | 4037885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1179979 |
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| End bp | 1181442 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637976469 |
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| Product | tRNA(Ile)-lysidine synthetase-like protein |
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| Protein accession | YP_583243 |
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| Protein GI | 94310033 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00200666 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0296865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCAG GGAATTCGAC GCAACTGATC GCGCGTCTGA CCGACAAGGT CGCACAGGCT
CTACAGGCCA GTGCGACCTT TGTTGTTTCT GGCGATAGGC GGTTGGAGAC TGGTAGCCAA
CGGGCTGCCG ACGGGCAGCC CGTGACCGTC GCGGTGGCGC TGTCAGGTGG CCGTGACTCC
GTGGCGCTGC TCCATGCCAC GCGGGAAGCC CTGGCCGCCA CGTGGCCGCT TGCGCGTCTG
GTGGCGCTGC ACGTGCACCA TGGCCTGCAG GCGCAGGCTG ATGACTGGGA CCGATTCTGC
ACCGCGCGGT GCGGCGATCT GCAGGTGCCC TTGAGCAGCG CGCGCGTGAC GGTGCAGGCG
GCGACGGGCG AGGGCATAGA GGCCGCGGCG CGGCGAGCTC GCCATGAGGC GCTGGGCAGG
ATGTGTCGCG AGCAGGGCGC ACGGCTGCTG CTGTTCGCGC ATCATCGTGA CGATCAGGTG
GAAACCGTGC TGCTGCGGCT GTTCCGTGGA ACGGGTGTGG CCGGCATGGC TGGAATGCCC
GCGCGACGCC CGCTCGATGA ACGGGGCGAC ATTCAACTGG TGCGGCCATG GCTCGGTGTG
ACACGCGCCG AGATCGACGA TTACTGCGCG TGGCAGGGGT TGCGCTGGAT CGACGATCCC
TCGAACGCGG ACACGCGTTT CGCGCGCAAT GCGCTGCGCG CGCAATTGCC TGCACTATTA
CAGGCGTTTC CGGCCCTCTA TGAGAACGTG GCCCAGGCCG CCACGCATTT CGCACAGGCG
GCCGGCATGC TCGATGCGCT GGCCGCGCAA TCGCTGGCTT CGCTGGTCTG CGCCGGGCGC
GATGCCGACA CCATTTCAGA ACTTGATCTC GCGGGCCTGC GCGCCTTGCC ATCCGAGCAC
GCGGATGCCG TGCTGCGCCA CTGGCTGCGC GATCTCGGCA CCCAGTCGCC GTCGACGGCG
CGCCTGGCCG CGATGCGGGC CCAACTCATC CAGCATCAAG GTGGCGAGCC GGCCATCGCG
CACGATGGCC TGGTGTTGCG TCGTTTCCGT GACCGGCTGC TGGCCTGCCC AGCCGTGTCC
GCTGGAATGC CGGCGCCGTT TGCATTCGAG TGGCGCGGCG AATCGCGCAT CGTAGTGCCG
GCATGGCGTG GCGAACTGCA CTTCGAGCGT GATGACACCT TTGGTGTGCC CGAGTCTGTG
CTGCGCGTGC CGTTGAGGCT GGCTGGCAGG GTAGGGGGCG AGCGCATCGT CCTGCGTCCG
GGTGGCCCGG CGCGAGCGCT GAAACAGGCC TATCAGGAGG CGGATATTCC CGCATGGCGG
CGAGCGCATC TGCCGCTGCT ATGGAGTGCC GATGTGCTGG TCCTGGCGGC CGGTTTGGGC
ATGCATCGTC GCTGGCCCAA CGATGCGCCA CATGCCCCGC GGTGGCGCGT GGAGTGGCTC
GCACGGCCCG ATCTGCGCGG CTAA
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| Protein sequence | MSAGNSTQLI ARLTDKVAQA LQASATFVVS GDRRLETGSQ RAADGQPVTV AVALSGGRDS
VALLHATREA LAATWPLARL VALHVHHGLQ AQADDWDRFC TARCGDLQVP LSSARVTVQA
ATGEGIEAAA RRARHEALGR MCREQGARLL LFAHHRDDQV ETVLLRLFRG TGVAGMAGMP
ARRPLDERGD IQLVRPWLGV TRAEIDDYCA WQGLRWIDDP SNADTRFARN ALRAQLPALL
QAFPALYENV AQAATHFAQA AGMLDALAAQ SLASLVCAGR DADTISELDL AGLRALPSEH
ADAVLRHWLR DLGTQSPSTA RLAAMRAQLI QHQGGEPAIA HDGLVLRRFR DRLLACPAVS
AGMPAPFAFE WRGESRIVVP AWRGELHFER DDTFGVPESV LRVPLRLAGR VGGERIVLRP
GGPARALKQA YQEADIPAWR RAHLPLLWSA DVLVLAAGLG MHRRWPNDAP HAPRWRVEWL
ARPDLRG
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