Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1042 |
Symbol | |
ID | 4037839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1132266 |
End bp | 1133093 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637976423 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_583197 |
Protein GI | 94309987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.681358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGATCG ACACGCACTG CCACCTCGAC GCCAGCGAGT TCGATGCCGA CCGGGCTGAC GTCACGGACG CGGCTGCGGC TGCCGGTGTG ACCGGCATTG TGTTGCCGGC CGTGGCAGTG GCGAACTTCG ACGTGGTGCG TGGGCTGGCG CATACCGACC CACGCTGTGT CTATGCGCTC GGCATCCACC CGCTGTACTC GCGGGCCGCC GGGCAGGCCG ATCTCGATGA ACTGCGCCGC CAGGTGACGG CGTCGATCGA CGATCCGCGC CTCGTTGCCA TTGGCGAAAT CGGGCTCGAC TTCTTCGTGC CTGGGCTCGA CGCCGCCCAT CAAACCTGGC TGTACGCGGA GCAGTTGAAG ATCGCGCGCG ACTTCGACCT GCCCGTGCTG CTGCACGTGC GCAAGTCGCA GGACCAGATC CTGGCGCAAC TGCGTCGCGC GGGCGTGCGG CAGGGTATCG CCCATGCGTT CAACGGCAGT CACGATCAGG CGCACCATTA CGTGACCCAC GGCATGAAGC TCGGATTCGG CGGCAACGTG ACGTTTTCCC GCGCGCGGCA GATCCGCCGC CTGGCCGCCG AATTGCCGAT CGAGTCGATC GTGCTGGAAA CGGACGCGCC CGATATCGCG CCCGCCTGGC TTTCTGACGA TCAGTTCGGC GAGCAGCACA AGGCCCGCAA CACGCCTGCG GAAGTGGTGG GCGTGGCGCG CGTCATGGCC GAGCTGCGCG GCGTCTCGGA ACGAGAGCTT GCCGACACCA TGTGGCGCAA TTCCGTGGCC GCGCTGCCAA GACTGGCGGC GTTCGCGGAT GTCATGGCCC CTCGCTAG
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Protein sequence | MWIDTHCHLD ASEFDADRAD VTDAAAAAGV TGIVLPAVAV ANFDVVRGLA HTDPRCVYAL GIHPLYSRAA GQADLDELRR QVTASIDDPR LVAIGEIGLD FFVPGLDAAH QTWLYAEQLK IARDFDLPVL LHVRKSQDQI LAQLRRAGVR QGIAHAFNGS HDQAHHYVTH GMKLGFGGNV TFSRARQIRR LAAELPIESI VLETDAPDIA PAWLSDDQFG EQHKARNTPA EVVGVARVMA ELRGVSEREL ADTMWRNSVA ALPRLAAFAD VMAPR
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