| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1040 |
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| Symbol | |
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| ID | 4037837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1130222 |
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| End bp | 1131472 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976421 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_583195 |
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| Protein GI | 94309985 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.678846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACTTTC CTTACGAATG GCAGATCGGC TGGCGCTACA CCCGCGCGAG CAAGCGCGCC
AGCCGCAATA CGTTCATTTC ATTCATTTCG ATGATTTCGA TGATGGGCAT CGCGCTTGGC
GTGGCCGCCC TGATCGTCGT GCTCTCGGTC ATGAACGGCT TCCAGAAGGA AGTGCGCGAT
CGGATGCTGT CGGTGCTGTC GCACATCGAA GTCATCGGCG CCGCGCCGCT GACGGACTGG
CAGAAGACGG CCGCCGAGGC CCTGCGCAAC AAGGAAGTGG TGGGCGCCGC GCCGTATGTG
GCGGCCCAGG CCATGATGAC GCGGGAAGAC GTGGTGCGCG GCGTGCTGCT GCGCGGCGTG
GACCCCGCCG AAGAGCCCAA GGTGTCGGAT ATCGCCAACC AATTTCGCGC CGGCAGCATG
AACGCGCTGG CGCCGGGTGG GTTCGGCATC GCACTCGGCA GTGAACTGGC CAATGCACTG
GGCGTGCGCG TGGGCGACAA GGTGATGCTG GTGGTGCCGC AAGGCACGAT CACGCCGGCC
GGAATGCTGC CGCGCCTCAA GCAGTTCACC GTGGCCGGCG TGTTCTCGTC GGGTCACTAC
GAGTTCGATA GCGCGCTGGC GCTGATCAAC ATCGGCGATG CGGAAACGCT GTTCCGCCAG
AGCGGACCCA CGGGCGTGCG ACTGAAACTG CAGGACATGC AGCGCGCGCC GCAGGTGGCC
CAGGAGCTGG CGGGCACCAT GAGCGGCGAC CTCTACCTGC GCGACTGGTC GAAGCAGAAC
CGCAACTGGT TCGCCGCCGT GCAGACCGAA AAGCGCATGA TGTTCATCAT CCTGACGCTG
ATCATCGCCG TGGCCGCGTT CAACCTGGTG TCCACGCTGG TCATGACCGT GACTGACAAG
CAGGCCGACA TCGCGATCCT GCGCACGATG GGCGCCCAGC CGCGCTCGAT CATGAAGATC
TTCATCGTTC AAGGCGTGGC CATCGGCTTC ATCGGCACCT TGCTCGGCGT ATTGGGCGGC
ACGCTGATCG CCACCAATAT CGACGTGATC GTGCCTTTCA TCGAGCGGAT CCTGCATGTG
CAGTTCCTGC CCAAGGACAT CTACTTCATT AGCGAATTGC CTTCGGACCC GCGCATGAAC
GACATCGCTA CCATCGGTAT CATTTCCTTC GTGCTGGCGT CGCTGGCCAC GATCTACCCG
AGCTGGCGCG CCTCGCGCGT GAACCCGGCG GAGGCGCTGC GCTATGAGTG A
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| Protein sequence | MNFPYEWQIG WRYTRASKRA SRNTFISFIS MISMMGIALG VAALIVVLSV MNGFQKEVRD
RMLSVLSHIE VIGAAPLTDW QKTAAEALRN KEVVGAAPYV AAQAMMTRED VVRGVLLRGV
DPAEEPKVSD IANQFRAGSM NALAPGGFGI ALGSELANAL GVRVGDKVML VVPQGTITPA
GMLPRLKQFT VAGVFSSGHY EFDSALALIN IGDAETLFRQ SGPTGVRLKL QDMQRAPQVA
QELAGTMSGD LYLRDWSKQN RNWFAAVQTE KRMMFIILTL IIAVAAFNLV STLVMTVTDK
QADIAILRTM GAQPRSIMKI FIVQGVAIGF IGTLLGVLGG TLIATNIDVI VPFIERILHV
QFLPKDIYFI SELPSDPRMN DIATIGIISF VLASLATIYP SWRASRVNPA EALRYE
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