| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1038 |
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| Symbol | |
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| ID | 4037835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1127253 |
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| End bp | 1128953 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976419 |
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| Product | exonuclease RecJ |
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| Protein accession | YP_583193 |
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| Protein GI | 94309983 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.329478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA TTGCCATCCG CTCCTTCTCC GACGAACACG CAAAGGCCCT GGCGGCCTCG
GGTCTGCATC CGACGCTGGC GCGCATCCTG TCCGCGCGCG GCGTAGCCCA ACCCTCCGAA
CTGGCCACGG ACCTGCCCGA ACTGGCGCCG CCGGCCAGCA TGAAAGGCAT CGGCCATGCG
GCCGAGTACC TGGCCGACGC GATTGCCGCG AATCGCAAGC TGCTGATCGT GGCTGACTAC
GATTGCGATG GCGCCACGGC CTGCGCGGTG GGCGTGCGCG GGCTGCGCAT GCTGGGCGCG
CGCGTCGACT ACATCGTGCC GAACCGCTTC GAGTACGGCT ACGGGCTGAC GCCGGAGATC
GTCGAACTGG CGGCCCGGCA ACATCCTGAC GTGATCGTCA CGGTCGACAA CGGCATCGCC
AGCGTCGACG GCGTGGCGGC CGCCAACGCA CGCGGCATCG ACGTCGTGGT GACCGACCAC
CACCTGCCCG GCGAGACGTT GCCCGAGGCT GCGGTGATCG TGAACCCGAA CCAACCGGGA
TGCGAGTTCC CGAGCAAGAA CCTGGCGGGT GTCGGGGTGA TGTTCTATGT GCTGCTGGCC
CTGCGCGCCG AGTTGCGCCG CCGCGGCGTG TACACCCAGG CCACCCAGCC GCCGCTGCAA
ACCCTGCTGG ACCTCGTGGC GCTGGGCACG GTGGCCGACG TGGTCAAACT GGACACGAAC
AACCGGATTC TGGTGGCCCA GGGGCTGAAG CGCATGCGCG CAGGACGGAT GCATCCCGGC
GTGGCGGCAC TGTTCCGTGC CGCCGGCCGC GAAGCCTCGC GCGCAAACAC GTTCGACCTC
GGCTTCGGCC TGGGCCCGCG TCTGAATGCG GCGGGCCGGC TGGCGGATAT GTCGCTCGGC
ATCGAGTGCC TGCTGACCGA CGACGCCAAT CGCGCCTGGG AAATCGCCCA GGAACTGGAC
GGCATGAACC GCGAGCGGCG CGATATCGAG GCTGGAATGC AGCAGGAAGC ACTTCAGATC
CTCGAACAGC CGCTAGCCGG GCTGGACCCG ACATCGCGTC ACACCGTCAG CGTGTTCCAT
GACACGTGGC ACCAGGGCGT GATCGGCATC GTCGCATCGC GGCTCAAGGA AAAATTCCAC
CGCCCGACCA TCACGTTCGC GCCCGGCGAC GAGGAGCACA TCAAGGGTTC AGGGCGATCG
ATCCCCGGTT TTCACCTGCG CGACGCGCTG GATCTGGTGT CGAAGCGCCA CCCGGGACTG
CTGGTCAAGT TCGGCGGACA CGCGATGGCG GCCGGTTTGA CCGTGCGCGC CAAGGACTTC
GACACCTTTG TCAGCGCGTT TGAGGAAGTT GGCCGCGAAT GGCTGACCGA TGACCAATTG
GCGCGTGTGA TCGAGACTGA TGGCGATATC GAGGATGCGT GCTTCAGCCC GGAATTCGTC
ACCCTGCTGG AAGGTCAGGT CTGGGGCCAG GGTTTCCCGG CACCAACGTT CTGCGGCGAG
TTCGACGTAT TGCGCCAGAC CGTGCTCAAG GGCAAGCACC TGAAACTCCA GCTCGGTCGG
GGCAGCCAGC GCTTCGACGC CATCTGGTTC AACCATGCCG ATGCGCTTGA TGGCGCCAGC
GCGATGGTGG CTTACCGGCT CGACAACAAC ACATTCAACG GAATGACCCG GGTGCAACTG
GTGATCGAGC ACGCGCAGTA A
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| Protein sequence | MTRIAIRSFS DEHAKALAAS GLHPTLARIL SARGVAQPSE LATDLPELAP PASMKGIGHA
AEYLADAIAA NRKLLIVADY DCDGATACAV GVRGLRMLGA RVDYIVPNRF EYGYGLTPEI
VELAARQHPD VIVTVDNGIA SVDGVAAANA RGIDVVVTDH HLPGETLPEA AVIVNPNQPG
CEFPSKNLAG VGVMFYVLLA LRAELRRRGV YTQATQPPLQ TLLDLVALGT VADVVKLDTN
NRILVAQGLK RMRAGRMHPG VAALFRAAGR EASRANTFDL GFGLGPRLNA AGRLADMSLG
IECLLTDDAN RAWEIAQELD GMNRERRDIE AGMQQEALQI LEQPLAGLDP TSRHTVSVFH
DTWHQGVIGI VASRLKEKFH RPTITFAPGD EEHIKGSGRS IPGFHLRDAL DLVSKRHPGL
LVKFGGHAMA AGLTVRAKDF DTFVSAFEEV GREWLTDDQL ARVIETDGDI EDACFSPEFV
TLLEGQVWGQ GFPAPTFCGE FDVLRQTVLK GKHLKLQLGR GSQRFDAIWF NHADALDGAS
AMVAYRLDNN TFNGMTRVQL VIEHAQ
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