Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1000 |
Symbol | hrcA |
ID | 4037797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1092058 |
End bp | 1093104 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976381 |
Product | heat-inducible transcription repressor |
Protein accession | YP_583155 |
Protein GI | 94309945 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.897322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.518947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAC GTTCAAAAAA GCTTCTCAAG ACCCTGATCG AGCGATACAT CGTCGAGGGG CAGCCCGTGG GCTCGCGCAC CCTGTCGAAG TTCTCGGGGC TTGATCTCTC GCCGGCCACC ATCCGCAACG TGATGTCGGA CCTCGAGGAG ATGGGTTTCA TCGCCAGCCC ACATACCTCG GCTGGCCGAA TCCCCACGCC GCGCGGGTAC CGGCTGTTTG TCGACACGAT GCTGACGGCG CGCCCGCTGG AGCGCGCGCC GGAGTTCAGT GCCGAGTTGG CGGAGCTGAC CGGCCAGATC CAGGGGCAAC TGGGTGGCCA GCAGTTCGGG CCGCAGCGCA TGATCACGGC GGCAGCGCAT ACGCTTTCGA ATCTTTCTCA TTTCGCTGGC GTGGTGATGA CGCCACGGCG CGCGCAGTCG TTCCGTCAGG TGGAATTCAT GCGGTTGTCT GACAAGCGCA TCCTGCTGAT CATCGTCAGC CCGGAAGGGG ATGTGCAGAA CCGCATCATC CAGACCGACC TGGCGTACAC GCCGGGCCAG CTCATCGAGG CGGCGAACTT CTTCAACTCG CACTATGCGG GCATGAGCTT CGACGCCGTG CGCGACCACC TGCGCGTGGA GTTGCAGGAC CTGCGCCGCG ACATGTCCGC GCTGATGCAG GCGGCGGTCG AGGCGGGCAG CAGCGCAATG GCCGAGGACA ACGAGCAGGT GTTCATTTCA GGCGAGCGCA AGCTGCTGGA AGTGGAAGAC CTGTCATCGA GCATGGACAA GCTGCGTCGC CTGTTCGACG TGTTCGAGCA CAAGACGAGC CTGCTGCAGC TGCTCGATGT GTCGAGTCAC GCGCAAGGCG TGCAGATCTT CATCGGCGGC GAAAGCCAGC TTGTGCCGAT CGAGGACATG GCCGTGATCA CCGCGCCATA CGGGGTGGAT GGCCAGATCG TTGGCACCCT GGGCGTGATC GGCCCCACGC GGATGGCCTA CGAACGGGTG ATCCCGATCG TCGATATCAC CGCGCGGCTC CTGTCCAGCG CGCTCAGCCA GAGCTGA
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Protein sequence | MDERSKKLLK TLIERYIVEG QPVGSRTLSK FSGLDLSPAT IRNVMSDLEE MGFIASPHTS AGRIPTPRGY RLFVDTMLTA RPLERAPEFS AELAELTGQI QGQLGGQQFG PQRMITAAAH TLSNLSHFAG VVMTPRRAQS FRQVEFMRLS DKRILLIIVS PEGDVQNRII QTDLAYTPGQ LIEAANFFNS HYAGMSFDAV RDHLRVELQD LRRDMSALMQ AAVEAGSSAM AEDNEQVFIS GERKLLEVED LSSSMDKLRR LFDVFEHKTS LLQLLDVSSH AQGVQIFIGG ESQLVPIEDM AVITAPYGVD GQIVGTLGVI GPTRMAYERV IPIVDITARL LSSALSQS
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