Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0976 |
Symbol | |
ID | 4037773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1062002 |
End bp | 1063171 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976357 |
Product | putative aminotransferase |
Protein accession | YP_583131 |
Protein GI | 94309921 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.164056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAAT CCAACCTCGC CCCGCTGAAT CCGCCCCCGT CGCGCCTGCC CAACGTGGGC ACCACGATCT TTACCGTGAT GTCAGCGCTG GCGGCCGAAA AGAACGCCGT CAATCTCGGC CAGGGCTTCC CGGATTTCGA CTGCGACCCG CGCATCGTCG ACGCCGTGAC GCACGCAATG CGCACCGGTC ACAACCAGTA CCCGCCGATG GCCGGTGTGC CACAACTGCG CCAGGCCATT GCCGCCAAGA TCGCGAAGCT GTACGAACAC ACCTACGACT GGAATACCGA GATCACGGTG ACCGCGGGCG CCACGCAGGG CCTGTTGACC GCCATCCTCT GCGCCGTGCA TCCGGGTGAC GAAGTGATCG TGCTGGAACC GTGCTACGAC AGCTATCTGC CTGCAATCGA ACTGGCCGGC GCGACGGCCG TGCCCGTGAC GCTGGAAGCG CCGCTGTTCC GCATCCCGTT CGACAAGCTG GCCGCCGCGA TCACGCCGCG CACGCGCATG ATCATGATCA ACACCCCGCA CAACCCGACG GGCACGATCT GGCGCGAAGA GGACATGCAG CAACTGGCCG ACCTGCTGGC CGGCACCGAC ATCCTGCTGC TGTCCGACGA GGTCTACGAG CACATGGTCT ACGATGGCCA GCAGCACGAG TCGGTGGCAC GCCATCCCGA ACTGGCGCGA CGCAGCTTTG TCGTGTCGAG CTTCGGCAAG ACCTATCACG TGACGGGCTG GAAGGTCGGC TTCGTGGCCG CCCCGGCCGC GCTGTCTAAC GAATTCCGCA AGGTCCACCA GTTCAACGTG TTCACGGTGA ACACGCCGGT GCAGTACGGG CTGGCGGATT ACATGGCCGA CCCGGCCCCG TACCTGAACC TCTCCGCGTT CTACCAAGCC AAGCGCGACT ACTTCCGTGC GGGCCTGGCC GGCACGCGCT TCAAGCTTCT GCCATCGGAC GGCACCTACT TCCAGTGCGT CGACTACTCG GCGATCTCCG ATATGAGCGA GGCCGATTTC TCGATGTGGC TCACGCGCGA AATCGGCGTT GCCGCGATTC CGGTCTCGGC GTTCTACTCC ACGCCGCGTG AATCGGGTGT CGTGCGCTTC TGTTTCGCGA AGAAGGAAGA GACGCTGAAG CTGGCGCTGG ATCGTCTGGC AAAGCTCTGA
|
Protein sequence | MAESNLAPLN PPPSRLPNVG TTIFTVMSAL AAEKNAVNLG QGFPDFDCDP RIVDAVTHAM RTGHNQYPPM AGVPQLRQAI AAKIAKLYEH TYDWNTEITV TAGATQGLLT AILCAVHPGD EVIVLEPCYD SYLPAIELAG ATAVPVTLEA PLFRIPFDKL AAAITPRTRM IMINTPHNPT GTIWREEDMQ QLADLLAGTD ILLLSDEVYE HMVYDGQQHE SVARHPELAR RSFVVSSFGK TYHVTGWKVG FVAAPAALSN EFRKVHQFNV FTVNTPVQYG LADYMADPAP YLNLSAFYQA KRDYFRAGLA GTRFKLLPSD GTYFQCVDYS AISDMSEADF SMWLTREIGV AAIPVSAFYS TPRESGVVRF CFAKKEETLK LALDRLAKL
|
| |